| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0436 |
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| Symbol | |
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| ID | 8131351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 500649 |
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| End bp | 502052 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644863714 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003016028 |
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| Protein GI | 253686838 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACTC ATCAATTGAA AAAGAACAGC CTGGGGCTGT GGTCGTTGGT CTTCTTTGTT
GTGGCTGCGG CCTCGCCGTT GACCGGTGTG GTAGGCGGTC TGCCCGTTGC GATCTCCGCT
GGCAACGGGG CGGGAATCCC AGCGGTGTAC CTGATGGCTG GCGGTATACT GCTGATTTTC
TCTTTTGGCT ATATCGCCAT GAGCCGCTAT GTGACTAACG CCGGCGCATT TTATAGCTAC
ATCACGCTGG GATTGGGGCG CCGCGCGGGC TTTAGCGCCT TATCCGTCGC GCTGCTGGCC
TATTTTGCCA TTCAGATCGC GGTGGTTGCG ATGTTTGGCT TCTTCAGCAG CATGTATTTA
CAAGAGCATC TTGGTATTGA ACTGCCGTGG TGGGGCTACA GCGTAGCGAT GCTGTTGCTG
ATGTGCCTGT TGGGCATTGA GAGTGTGGAG GTCGGCGGGC GCGTACTCGG CGTACTGATG
CTGATGGAAG TGGGCATCAT GCTGGTGGTC GATATTGCGG TACTGCTGTC GCATGATACA
CCACCGCTCA CGCTGGAGGC GTTTTCGCCC AGTGTGATTA ATCAAGGCAG CATTGGCATT
GCGCTGATTT TCAGTATCGC TGCGTTTATC GGATTTGAAT CCACGGCGAT CTACGGTGAA
GAGTGCCGCA ATCCTGAGAA AACGATTCCT CGTGCGACGC TGGCTGCGGT TATCTTGATT
ATGCTGTTCT TTGCCTTCAC CAGTTGGATG ATGGTGCAAG CCTATGGGGT GGGTCAGGTA
CAGCAGCAGG CGATCAACGA TCCCGGACGC TTTATCTTAA ACGTATCGAC CGCACTGGTT
GGGAAATGGT CTGAACAGAT GATATCGCTG CTGTTGATCA CCAGTCTGTT TGCTGCGGCT
CAGGCGTTTC ACAATAACAT CTCTCGCTAC CTGTTTAGCA TCGGGCGTGA CGGCGTGTTG
TCGACGAAAT TGGCGCAGGT GAGTGAAAAT AAAGGGACGC CTTACGTGGC GAGTATCGTT
CAAACGATCG TTGTGTTGAC CGTGCTGTGC GCGATGGTGG TAGCGGATCT CGATCCGATG
ATGCAGATCT TCGCGTTGGG ATCGGCGATC GCGACGATGG CGATTCTGCT GCTTCAGGTC
GGTGTATCGC TGGCGGTTAT TCGTTTCTTC CAGCGTGAAA CCCAGCATCC AGTTTCAGCA
TGGAGCCGCC TGTGGGCACC GATTATCTCG ACGGTAGCGA TGCTCTCGGC ATTAATTATG
GTCGTTAGAA ACGTTGATGT TCTGAGTGGT TCATCATCCC AGATCGTTTC GCTGTTGCCC
TGGGGCGTGT TTGGCATCGC CATCATGGGC TACCTGTCCG CCAGCCGCGT ACGCATCCCG
TCGCCGCAGG AAAATATGCC GTAA
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| Protein sequence | MNTHQLKKNS LGLWSLVFFV VAAASPLTGV VGGLPVAISA GNGAGIPAVY LMAGGILLIF
SFGYIAMSRY VTNAGAFYSY ITLGLGRRAG FSALSVALLA YFAIQIAVVA MFGFFSSMYL
QEHLGIELPW WGYSVAMLLL MCLLGIESVE VGGRVLGVLM LMEVGIMLVV DIAVLLSHDT
PPLTLEAFSP SVINQGSIGI ALIFSIAAFI GFESTAIYGE ECRNPEKTIP RATLAAVILI
MLFFAFTSWM MVQAYGVGQV QQQAINDPGR FILNVSTALV GKWSEQMISL LLITSLFAAA
QAFHNNISRY LFSIGRDGVL STKLAQVSEN KGTPYVASIV QTIVVLTVLC AMVVADLDPM
MQIFALGSAI ATMAILLLQV GVSLAVIRFF QRETQHPVSA WSRLWAPIIS TVAMLSALIM
VVRNVDVLSG SSSQIVSLLP WGVFGIAIMG YLSASRVRIP SPQENMP
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