| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0398 |
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| Symbol | |
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| ID | 8131313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 454792 |
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| End bp | 456231 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644863677 |
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| Product | aspartate ammonia-lyase |
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| Protein accession | YP_003015991 |
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| Protein GI | 253686801 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1027] Aspartate ammonia-lyase |
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| TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAACGA ATATCCGTAT TGAAGAAGAC CTGTTAGGTA CCCGTGAAGT CCCTGCTGAT
GCCTATTATG GTATCCATAC GCTGCGTGCA ATTGAGAACT TTTATATCAG CAATAGCACC
ATCAGCGATA TTCCAGAATT TGTCCGCGCC ATGGTAATGG TAAAAAAAGC GGCCGCACTG
GCGAATAAAG AACTGCAAAC CATCCCGCGT AAAATTGCCG ACACTATTCT GCAAGCCTGT
GATGAAGTGT TGAATAACGG TAAATGTCTG GATCAGTTCC CTGTCGATGT CTATCAGGGC
GGCGCGGGTA CGTCAGTCAA CATGAACACC AACGAAGTGC TGGCGAATAT CGGTCTGGAG
CTGATGGGTC ACCAGAAAGG TGAATATCAA TACCTGAACC CGAACGACCA CCTGAACAAA
TGCCAGTCCA CCAACGATGC TTACCCAACC GGCTTCCGCA TCGCGGTATA CACCTCCATC
CTGAAGCTGG TTGAAGCGAT TACCCAACTG AGCGATGGCT TTGAGCGCAA AGCAAAAGAG
TTCGAAAACA TCCTGAAAAT GGGCCGTACC CAGTTGCAGG ACGCCGTACC GATGACCCTT
GGTCAGGAAT TCCACGCGTT CAACGTACTG CTGAAAGAAG AAAACCGTAA CCTGCTGCGC
ACCGCCGAGC TGCTGCTGGA AGTGAACCTG GGCGCTACCG CCATCGGTAC GCGTCTGAAC
ACGCCGGATG AGTACCAGAA ACTGGCCGTT CAACATTTGG CAAAAGTCAG CGGCCTGCCT
TGCGTACCGG CTGAAGACCT GATCGAAGCA ACGTCCGACT GCGGCGCCTA CGTGATGATG
CACAGCGCTC TGAAACGCGT GGCGGTAAAA CTGTCGAAGA TCTGTAACGA CTTGCGTCTG
CTGTCTTCCG GCCCGCGCAC TGGCCTGAAC GAAATCAACC TGCCAGAATT GCAAGCCGGC
TCGTCCATCA TGCCAGCCAA AGTTAATCCG GTTGTCCCAG AAGTCGTCAA TCAGGTGTGC
TTCAAGGTCA TCGGCAACGA TACCTGCGTC ACCATGGCGG CAGAAGCGGG TCAGTTGCAG
TTGAACGTGA TGGAACCGGT TATCGGACAA GCTATGTTCG AATCCATCCA GATCCTATCC
AGCGCCTGCT ACAACCTGCT GGAAAAATGC GTCGACGGCA TCACCGCTAA CAAAGACGTG
TGTGAAGCCT ACGTCTTCAA CTCTATCGGT ATCGTGACCT ACCTGAACCC GTTCATCGGT
CACCACAACG GCGATATCGT CGGGAAAATC TGTGCCGAAA CCGGTAAGAG CGTGCGTGAA
GTGGTGCTGG AGCGCGGCCT GCTGACCGAA GAACAGCTGG ACGACATTTT CTCCATCCAG
AACCTGATGC ACCCGGCCTA TAAAGCCAAA CGCTACACCG ACGAAAACGA AGCCGTTTAA
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| Protein sequence | MSTNIRIEED LLGTREVPAD AYYGIHTLRA IENFYISNST ISDIPEFVRA MVMVKKAAAL
ANKELQTIPR KIADTILQAC DEVLNNGKCL DQFPVDVYQG GAGTSVNMNT NEVLANIGLE
LMGHQKGEYQ YLNPNDHLNK CQSTNDAYPT GFRIAVYTSI LKLVEAITQL SDGFERKAKE
FENILKMGRT QLQDAVPMTL GQEFHAFNVL LKEENRNLLR TAELLLEVNL GATAIGTRLN
TPDEYQKLAV QHLAKVSGLP CVPAEDLIEA TSDCGAYVMM HSALKRVAVK LSKICNDLRL
LSSGPRTGLN EINLPELQAG SSIMPAKVNP VVPEVVNQVC FKVIGNDTCV TMAAEAGQLQ
LNVMEPVIGQ AMFESIQILS SACYNLLEKC VDGITANKDV CEAYVFNSIG IVTYLNPFIG
HHNGDIVGKI CAETGKSVRE VVLERGLLTE EQLDDIFSIQ NLMHPAYKAK RYTDENEAV
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