Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0394 |
Symbol | |
ID | 8131309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 449715 |
End bp | 450908 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644863673 |
Product | ABC-2 type transporter |
Protein accession | YP_003015987 |
Protein GI | 253686797 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGACCC TCGCCACCCT CATCCGGTTT GAGCTACGCA GCTTACTGCG CGATCCGACC CTCTTGCTCA CCCTGTTCGG CGGGATCCTG CTCTATTCCT TTCTCTATCC GCGGCCTTAC CTCGCCCAGA CGCCGCGCGA ACTACCGGTG GTGCTGGTGG ATGAAGATGG AACGCAGCTC TCGCGCCGTC TGGCATTTAT GGCCGATTCC ACGCCGGAGG TACGGCTGGT GGCACAGCGT AATACGCTGG ATGAAGCCAA AGCGCTGCTT CTGCATGGCG AAGCGAAAGG GATTCTCTAT ATTCCGCGCC ACTTCTACCG CGATATCATG CAGGGAAAAA GCGTCACGGT AAGCTATTCA GCCGATGCCA GCTACTTTCT GATCTACGGC GCGATCGCGC AGTCTTTGGC AACGGTCGGT GGCACCGCGG GCGCACAGGT TAAAGTCGCA CGGCTGCTTG CTCAGGGGGA AGGCATACCC GCCGCCAGCT CACAGTGGCA GGCTACCACG CTGAATACCG TGCCGGTATT TAACCCCACC ATGGGCTATG TCGACTACGT GGTTCCCGGT GTTTTCATGT TAATACTGCA TCAGATTTTG CTGATGGGAT GCGGCCTGCT CGGTGCCGGA CAAAACCAGC GCACGCAGTC CGGCGGCGTT CACTATTGGC AATACGCGAC ACCGTGGCGT TTACTGCTGG CACGCACCGC AGTCGTTGGC GGTGCCTACC TGCTGTCGCT ACTCTATATG CTCGGTTTTT GTCTGGATGC CTACGGCATC GCACGCGAGG CCAGCATGAG CCAACTGCTG CTGTTTACAC TGCCCTTTCT GCTCTCGACG CTGTGGCTAG GCGTAGTACT GGGAGCCACC TTTACGCGCA AAGATCTCCC CAGTCAGGCA GTGCTACTCT CTTCCATTCC AATTGTCTTT CTCTCTGGCT TCATCTGGCC TGTAGAAATG ATCCCGGCCC CTCTGAACTG GCTGGCGCAG TGGATACCTG CCGTCTTTAC GATTCAGGGA ATATTACGCC TTAATCAGAT GGGCGCTGAT TTTTCTCAGA TCGACGCTTT CTGGTGGCAT TTGTGGATGC TGGCCGCGCT GTACGGCCTG CTGGCGTGGG GGATGTTAGG GTATCGGCAG CGGCAATACC GCCGGGAGAA TCAGGCGGCG CGTCGATGGC TGGCACGTGA TTGA
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Protein sequence | MLTLATLIRF ELRSLLRDPT LLLTLFGGIL LYSFLYPRPY LAQTPRELPV VLVDEDGTQL SRRLAFMADS TPEVRLVAQR NTLDEAKALL LHGEAKGILY IPRHFYRDIM QGKSVTVSYS ADASYFLIYG AIAQSLATVG GTAGAQVKVA RLLAQGEGIP AASSQWQATT LNTVPVFNPT MGYVDYVVPG VFMLILHQIL LMGCGLLGAG QNQRTQSGGV HYWQYATPWR LLLARTAVVG GAYLLSLLYM LGFCLDAYGI AREASMSQLL LFTLPFLLST LWLGVVLGAT FTRKDLPSQA VLLSSIPIVF LSGFIWPVEM IPAPLNWLAQ WIPAVFTIQG ILRLNQMGAD FSQIDAFWWH LWMLAALYGL LAWGMLGYRQ RQYRRENQAA RRWLARD
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