Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0378 |
Symbol | |
ID | 8131292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 430747 |
End bp | 431784 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644863657 |
Product | peptidase M48 Ste24p |
Protein accession | YP_003015972 |
Protein GI | 253686782 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTG AGGGGCATTA TCAATACCCC GGATTGGCGG CCCGCGTGGC CGCTTCTCTT CATTTAGCGG ACAACGGTTC GATGATGGTG CTGAACACTG GGTCATCAAA CACGACATTT TCGCTGGAGC AGGTTACGGT TTCCGATGCG TTGGGTTCCA TTCCTCTGAC GCTAACGTTT CCTGACGGTG GCCGCTTTGT GCCTGCCGAC GATCCCACCT TTCGAGCATG GTATTCCGCC CGCCGCCGAC CGGGGCTTGT CCATCGTCTG GAGCGCCATA AGCGTGGCGT CATTCTCACG CTGTTCGCCA CGATCCTGGT CATCATCAAT TACGTTTATG TTGTGCTGCC GTGGGCGAGT TCCGCACTGG CGCTACGTAT ACCTACCGCG ATTGAGCAGC AGTTGGGGCA ACATACGCTG ACGCTGTTGC GGCACAGTGA TTTTACGCCT TCCAAGCTGC CTATTGAACG CCAACAGGCG ATGCAAGCGC TGTTTCAACA GGTTATGCCT GCAGACATGC GGGAAGATAA AACGCCGCTG CGTCTGGAGA TCATGTCTGC GCCTATCGGG CCGAATGCCT TTATGCTGGC AGATGGCACG CTGATTATCA GCGACGATCT GGTGACGCTG GCGAAAAGTG ATAACGAGTT AGCTGCGGTG ATGCTGCATG AAATGGGGCA CCACGCCTAC CGCCACCCAA TGCGCATGGT TGTTCGTTCA TCGCTGGTAT CGCTGACGTT CATGTGGATG ACGGGAGATG TCAGTGGCGT GGGGGATACC GTGTTGCAGT CTGCCGCTTT CATCAACGAG ATGCAGTTTT CCCGTGACAT GGAACGGGAA GCCGACGCGT GGGCAATAGC AGAAATGCAG CAGCAAGGGC GTTCGCTGCA ATCGATGCAG GCGATGTATC AGGCTCTCGT CGCTAACGAC CGCAGTCATG ATGAAGTGGA ATCGTTGGAT TTGCCCGACT GGCTGAGCAC GCACCCGGAT ATGGATGAAC GACTGAAGGT GATTGAAAGA GAGATGAATA AGCACTGA
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Protein sequence | MNIEGHYQYP GLAARVAASL HLADNGSMMV LNTGSSNTTF SLEQVTVSDA LGSIPLTLTF PDGGRFVPAD DPTFRAWYSA RRRPGLVHRL ERHKRGVILT LFATILVIIN YVYVVLPWAS SALALRIPTA IEQQLGQHTL TLLRHSDFTP SKLPIERQQA MQALFQQVMP ADMREDKTPL RLEIMSAPIG PNAFMLADGT LIISDDLVTL AKSDNELAAV MLHEMGHHAY RHPMRMVVRS SLVSLTFMWM TGDVSGVGDT VLQSAAFINE MQFSRDMERE ADAWAIAEMQ QQGRSLQSMQ AMYQALVAND RSHDEVESLD LPDWLSTHPD MDERLKVIER EMNKH
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