Gene PC1_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0378 
Symbol 
ID8131292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp430747 
End bp431784 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content55% 
IMG OID644863657 
Productpeptidase M48 Ste24p 
Protein accessionYP_003015972 
Protein GI253686782 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTG AGGGGCATTA TCAATACCCC GGATTGGCGG CCCGCGTGGC CGCTTCTCTT 
CATTTAGCGG ACAACGGTTC GATGATGGTG CTGAACACTG GGTCATCAAA CACGACATTT
TCGCTGGAGC AGGTTACGGT TTCCGATGCG TTGGGTTCCA TTCCTCTGAC GCTAACGTTT
CCTGACGGTG GCCGCTTTGT GCCTGCCGAC GATCCCACCT TTCGAGCATG GTATTCCGCC
CGCCGCCGAC CGGGGCTTGT CCATCGTCTG GAGCGCCATA AGCGTGGCGT CATTCTCACG
CTGTTCGCCA CGATCCTGGT CATCATCAAT TACGTTTATG TTGTGCTGCC GTGGGCGAGT
TCCGCACTGG CGCTACGTAT ACCTACCGCG ATTGAGCAGC AGTTGGGGCA ACATACGCTG
ACGCTGTTGC GGCACAGTGA TTTTACGCCT TCCAAGCTGC CTATTGAACG CCAACAGGCG
ATGCAAGCGC TGTTTCAACA GGTTATGCCT GCAGACATGC GGGAAGATAA AACGCCGCTG
CGTCTGGAGA TCATGTCTGC GCCTATCGGG CCGAATGCCT TTATGCTGGC AGATGGCACG
CTGATTATCA GCGACGATCT GGTGACGCTG GCGAAAAGTG ATAACGAGTT AGCTGCGGTG
ATGCTGCATG AAATGGGGCA CCACGCCTAC CGCCACCCAA TGCGCATGGT TGTTCGTTCA
TCGCTGGTAT CGCTGACGTT CATGTGGATG ACGGGAGATG TCAGTGGCGT GGGGGATACC
GTGTTGCAGT CTGCCGCTTT CATCAACGAG ATGCAGTTTT CCCGTGACAT GGAACGGGAA
GCCGACGCGT GGGCAATAGC AGAAATGCAG CAGCAAGGGC GTTCGCTGCA ATCGATGCAG
GCGATGTATC AGGCTCTCGT CGCTAACGAC CGCAGTCATG ATGAAGTGGA ATCGTTGGAT
TTGCCCGACT GGCTGAGCAC GCACCCGGAT ATGGATGAAC GACTGAAGGT GATTGAAAGA
GAGATGAATA AGCACTGA
 
Protein sequence
MNIEGHYQYP GLAARVAASL HLADNGSMMV LNTGSSNTTF SLEQVTVSDA LGSIPLTLTF 
PDGGRFVPAD DPTFRAWYSA RRRPGLVHRL ERHKRGVILT LFATILVIIN YVYVVLPWAS
SALALRIPTA IEQQLGQHTL TLLRHSDFTP SKLPIERQQA MQALFQQVMP ADMREDKTPL
RLEIMSAPIG PNAFMLADGT LIISDDLVTL AKSDNELAAV MLHEMGHHAY RHPMRMVVRS
SLVSLTFMWM TGDVSGVGDT VLQSAAFINE MQFSRDMERE ADAWAIAEMQ QQGRSLQSMQ
AMYQALVAND RSHDEVESLD LPDWLSTHPD MDERLKVIER EMNKH