Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0374 |
Symbol | |
ID | 8131288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 427088 |
End bp | 428095 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644863653 |
Product | ornithine carbamoyltransferase subunit I |
Protein accession | YP_003015968 |
Protein GI | 253686778 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0078] Ornithine carbamoyltransferase |
TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACCGT TCTACAAGCG TCATTTTTTA AGGTTAATGG ATTTTACACC CGCAGAAATT GCCAATCTTT TAGCCCTGTC AACGAAACTG AAAGCCGATA AAAAAAACGG GACAGAAGTC CGCCGCCTGC AAGGTAAAAA CATCGCACTC ATCTTCGAAA AAGATTCGAC TCGTACTCGC TGCTCTTTCG AAGTTGCTGC ATACGATCAG GGCGCACAAG TGACCTATCT CGGCCCAAGC GGTAGCCAAA TCGGCCATAA AGAATCCATC AAAGATACCG CTCGCGTGCT GGGAAGAATG TACGACGGCA TTCAATATCG CGGCTATGGC CAGCAGATTG TCGAAACGCT GGCGCAATAC GCCGGTGTGC CAGTCTGGAA CGGACTGACG AACGAATTCC ACCCTACGCA GCTACTGGCG GATCTGCTGA CGATGCAGGA ACATTTGCCG GGTAAACCGC TGTCAGAAAT GGCGCTCGTT TACGTGGGCG ATGCGCGCAA CAACATGGGC AACACCATGT TGGAAGCAGC AGCGCTGACC GGACTGGATC TACGCCTCGT GGCGCCAAAA GCCTGCTGGC CAGATGCTGG TCTGGTGGCA GAGTGTCAGG CCGCGGCAGA GCAAACTGGC GGCAGCATCA CGCTGACGGA AGATATCGCT ACGGGCGTCG CAGGCGCAGA TTTCATTTAT ACCGACGTCT GGGTTTCCAT GGGGGAACCG AAAGAGACCT GGCAGGAGCG CATCGCGCTG CTGAAACCGT ATCAGGTGAA CGCGGCGATG ATTGCTGCGA CGGGCAATCC GCAGGTGAAA TTCCTGCACT GCCTGCCCGC TTTCCACGAC GATCAGACGA CGATGGGCCA ACAAATGGCA GAACAATACG GTCTGCACGG TGGAATGGAA GTCACGGACG AGGTCTTTGA ATCCGCGCAC AGCATCGTGT TCGATCAGGC GGAAAACCGT ATGCACACCA TCAAAGCGGT GATGGTCGCT ACGCTAGCGC AAGATTAA
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Protein sequence | MQPFYKRHFL RLMDFTPAEI ANLLALSTKL KADKKNGTEV RRLQGKNIAL IFEKDSTRTR CSFEVAAYDQ GAQVTYLGPS GSQIGHKESI KDTARVLGRM YDGIQYRGYG QQIVETLAQY AGVPVWNGLT NEFHPTQLLA DLLTMQEHLP GKPLSEMALV YVGDARNNMG NTMLEAAALT GLDLRLVAPK ACWPDAGLVA ECQAAAEQTG GSITLTEDIA TGVAGADFIY TDVWVSMGEP KETWQERIAL LKPYQVNAAM IAATGNPQVK FLHCLPAFHD DQTTMGQQMA EQYGLHGGME VTDEVFESAH SIVFDQAENR MHTIKAVMVA TLAQD
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