| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0309 |
|---|
| Symbol | |
|---|
| ID | 8131222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 359802 |
|---|
| End bp | 360689 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644863589 |
|---|
| Product | Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase |
|---|
| Protein accession | YP_003015904 |
|---|
| Protein GI | 253686714 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0313] Predicted methyltransferases |
|---|
| TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAG ACCAACAAGC AGATATTTCT GCATCTACCC TCTACATTGT CCCCACGCCA
ATCGGCAATC TGGGCGACAT CACGCAGCGT GCGCTGGCGG TATTGGCGAG CGTTGATCTG
ATCGCCGCAG AGGATACCCG CCATACCGGT CTGCTGTTAC AACATTTTGC GATTAATGCG
CGACTGTTCG CATTACACGA TCACAATGAA CAACAAAAAG CGGATGTGTT ACTGGCTAAA
TTGCAGTCAG GACAAAGCAT CGCGCTGGTT TCAGATGCGG GCACACCGCT GATTAACGAC
CCTGGCTACC ATTTGGTTCG ACGCTGCCGT GAAGCTGGCG TTCGCGTGGT GCCACTGCCG
GGCGCGTGCG CGGCGATAAC GGCGCTTTCC GCCTCTGGTC TGGCGTCTGA CCGCTTTTGC
TATGAAGGCT TTCTGCCTGC CAAAACCAAG GCGCGTAAAG ATACGCTACG CGATCTGGGG
GAAGAACCCC GTACGCTGAT TTTCTACGAA TCCACGCATC GCCTTTTGGA CAGCCTGCAG
GATATTAGCG AAGTGCTGGG GGCTGAGCGC TATGTGGTGC TGGCACGTGA AATTACCAAA
ACCTGGGAGT CGATTCACGG CGCACCCGTG GGCGAGTTGT TGGCCTGGGT CAAAGAGGAT
GAGAATCGGC GCAAAGGGGA AATGGTGCTG ATTGTGGAAG GGCATCAGGC TGATGACAGC
GCGCTGTCGG CGGAAGCGCT GCGTACGCTA ATGCTATTAC GCGCTGAGTT GCCGTTGAAG
AAAGCGGCGG CGCTGGCGGC AGAGATTCAC GGCGTGAAGA AAAACGCGCT TTACCGTTAT
GGGCTGGAGC AAGAAGGCGA TAGCGGTGAA TCGGGGGATG ACAAGTAG
|
|---|
| Protein sequence | MNQDQQADIS ASTLYIVPTP IGNLGDITQR ALAVLASVDL IAAEDTRHTG LLLQHFAINA
RLFALHDHNE QQKADVLLAK LQSGQSIALV SDAGTPLIND PGYHLVRRCR EAGVRVVPLP
GACAAITALS ASGLASDRFC YEGFLPAKTK ARKDTLRDLG EEPRTLIFYE STHRLLDSLQ
DISEVLGAER YVVLAREITK TWESIHGAPV GELLAWVKED ENRRKGEMVL IVEGHQADDS
ALSAEALRTL MLLRAELPLK KAAALAAEIH GVKKNALYRY GLEQEGDSGE SGDDK
|
|---|
| |