Gene PC1_0272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0272 
Symbol 
ID8131185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp321667 
End bp322167 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content52% 
IMG OID644863552 
ProductPTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN 
Protein accessionYP_003015867 
Protein GI253686677 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID[TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.518095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGCGT CGTTAAGTGA AAATAAAATG AACCACGATC CCGTATTGCA ACTCAGCACC 
GTATTACGTC CTGAGTGCAC CCGAAGCACC GTCCACTGCC AGAGTAAGAA ACGGGCATTG 
GAAATTATCA GCGAGCTGGC CGCCAGGCAG CTTAATATTC CTTCGCAGAT TATCTTTGAT 
GCCATCCTGA CCCGGGAGCG GATGGGCAGC ACGGGAATCG GCGGCGGCAT TGCCATTCCT 
CATGGCAAGC TGGAGGACGA TAATGCACTG GGCGCCATCG GTGTTTTCAT CCAGTTAGAG 
CAACCTATTG CTTTCGATGC TATTGATAAT CAGGCCGTTG ATCTGCTTTT TGCCTTGCTG 
GTTCCGGCGG AACAATGTAA AACCCATTTG CATACCCTGT CGCTTGTTGC CAAGCGGCTG 
GCGGATAAAA CGGTTTGCCG ACGCCTGCGT GCGGCGCAAA GCGATGAAGA GCTGTACCAG 
ATTATGACGG AAGCCGGTTA A
 
Protein sequence
MKASLSENKM NHDPVLQLST VLRPECTRST VHCQSKKRAL EIISELAARQ LNIPSQIIFD 
AILTRERMGS TGIGGGIAIP HGKLEDDNAL GAIGVFIQLE QPIAFDAIDN QAVDLLFALL 
VPAEQCKTHL HTLSLVAKRL ADKTVCRRLR AAQSDEELYQ IMTEAG