| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0249 |
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| Symbol | |
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| ID | 8131162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 292795 |
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| End bp | 293772 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644863529 |
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| Product | quinone oxidoreductase, YhdH/YhfP family |
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| Protein accession | YP_003015844 |
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| Protein GI | 253686654 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0608751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGCTT TAGTTCTTGA ACAGTCAGAC GGACTGACCC ACGCTCAGAT TCGCGAGATT
GACGCGGAGC AGCTTCCCAC CGGGGATGTA ACTGTCGATA TCAACTGGTC CGGCATTAAC
TATAAAGATG CGCTTGCCAT TACCGGCAAA GGCAAGATTA TTCGTAACTT CCCGATGGTT
CCTGGGATCG ACTTTGCAGG CACCGTACGC CACAGCGACA GCGATCGGTT TACCGCCGGC
CAGCCCGTCA TCCTGACCGG TTGGGGCGTG GGTGAAAACC ACTGGGGCGG ATTGGCGCAA
CAGGCTCGCG TAAAGAGCGA CTGGCTGGTT CCCCTGCCCG CTTCGCTGGA TGCACGTAAG
GCCATGATTC TGGGTACCGC GGGCTTCACC GCGATGCTGT GCGTCATGGC GCTGGAGGAC
GGCGGCATCA CGCCAGAAAG CGGCGACATT ATCGTGACTG GTGCCAGCGG CGGCGTTGGC
AGTACCGCTG TCGCCCTGCT TGCAGAGCTA GGTTATCAGG TCACTGCCGT CAGCGGCCGT
GCTGACAACA CCGATTACCT GAAGAAACTG GGTGCCAAAC AGGTGCTGGA TCGCAGCGAA
TTCAGCGGAA GCCCTCGCCC ACTGGAGAAA CAACGCTGGG CCGGCGCGGT TGATACCGTC
GGTGATAACG TACTGGCGAC GCTGCTGGCG CAGATGGATT ACAACGCGAC GGTCGCGGCG
TGTGGTCTGG CTGGCGGCAT TGCGCTGCCG ACTACCGTGA TGCCTTTTAT TTTACGTAAT
GTTCGCCTGC AAGGTGTGGA TTCCGTTATG GCACCGCTGG CTCGCCGTCA GCAGGCATGG
GAGCGTCTGG CTACCATCCT GCCAGAGTCG TTTTACCAGC AAGTCACGCA GGAAATCGGG
CTGGAAGACG TCCCTGCCAC TGCCGCTGCG CTGCTGGAAA ATAAAGTCAC TGGCCGCACG
CTGGTGAAAA TCAGCTAA
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| Protein sequence | MQALVLEQSD GLTHAQIREI DAEQLPTGDV TVDINWSGIN YKDALAITGK GKIIRNFPMV
PGIDFAGTVR HSDSDRFTAG QPVILTGWGV GENHWGGLAQ QARVKSDWLV PLPASLDARK
AMILGTAGFT AMLCVMALED GGITPESGDI IVTGASGGVG STAVALLAEL GYQVTAVSGR
ADNTDYLKKL GAKQVLDRSE FSGSPRPLEK QRWAGAVDTV GDNVLATLLA QMDYNATVAA
CGLAGGIALP TTVMPFILRN VRLQGVDSVM APLARRQQAW ERLATILPES FYQQVTQEIG
LEDVPATAAA LLENKVTGRT LVKIS
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