Gene PC1_0231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0231 
Symbol 
ID8131144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp277030 
End bp277797 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content50% 
IMG OID644863512 
Productextracellular solute-binding protein family 3 
Protein accessionYP_003015827 
Protein GI253686637 
COG category[T] Signal transduction mechanisms
[E] Amino acid transport and metabolism 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TACGTTTTGC TTTACTGACC AGCGCCCTGC TTGCTACCAG CGTATTCGCT 
CATGCCGATG ACCTTAGCGA CATTAAGTCC GCAGGCGTTC TCAAGATCGG CACAGAAGGC
ACCTACGCGC CTTACACCTA TCATGATAAG TCAGGCCAGT TGGTTGGTTT CGATGTGGAT
ATTGGCCGTG CGGTGGCAGA AAAACTCGGC GTGAAAGCCC AATTCATTGA AGGACGCTGG
GACGGGTTAA TCGCCGGTAT TGATGCCAAG CGCTACGATG CCGTCATCAA TCAGGTTGGC
GTAACCAAAG AGCGTCAGGC CAAGTATGAT TTCTCCAAGC CGTATATCGA TTCCAAGGCG
GTGCTGGTTG TCCGTGGTGA TAACACCACC CTCAAAGATT TCAGCGATCT GAAAGGCAAA
AAAGCAGCTC AGAGCCTGAC CAGTAATTAC TCTAAGCAAG CCACCAGCTA CGGTGCAGAC
ATTGTGCCGA CGGACGGCTT TAATCAGTCG CTGGATCTGG TTCTCAGCGG CCGTGCCGAC
GCCACGTTAA ACGACAATCT GTCATTCCTG GATTTCAAAA AGCATAAGCC AGATGCCAAC
GTGAAGATTG CCGCGACCTC AAAAGACGGC GAACCTTCCG CGATTCTGGT TCGTAAAAAC
CAGGCAACAC TGGTGGAAGC ATTGAATAAA GCTCTGGATG AAATCAAAGC AGACGGCACC
TATAAAACGA TATCTGTGCG ATACTTCGGG GAGGATGTTT CTCAATAA
 
Protein sequence
MKKIRFALLT SALLATSVFA HADDLSDIKS AGVLKIGTEG TYAPYTYHDK SGQLVGFDVD 
IGRAVAEKLG VKAQFIEGRW DGLIAGIDAK RYDAVINQVG VTKERQAKYD FSKPYIDSKA
VLVVRGDNTT LKDFSDLKGK KAAQSLTSNY SKQATSYGAD IVPTDGFNQS LDLVLSGRAD
ATLNDNLSFL DFKKHKPDAN VKIAATSKDG EPSAILVRKN QATLVEALNK ALDEIKADGT
YKTISVRYFG EDVSQ