Gene PC1_0200 details

Gene Information

• Locus tag: PC1_0200
• Symbol: nusG
• ID: 8131108
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 236035
• End bp: 236580
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 644863476
• Product: transcription antitermination protein NusG
• Protein accession: YP_003015796
• Protein GI: 253686606
• COG category: [K] Transcription
• COG ID: [COG0250] Transcription antiterminator
• TIGRFAM ID: [TIGR00922] transcription termination/antitermination factor NusG

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00968308
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGAAG CTCCAAAAAA ACGTTGGTAC GTCGTTCAGG CGTTCTCTGG TTTTGAAGGT 
CGCGTAGCAC AATCACTGCG TGAACATATC AAACTCCATA ATATGGAAGA ACTGTTTGGC 
GAAGTCATGG TTCCTACTGA GGAAGTAGTC GAAATTCGTG GTGGCCAGCG TCGCAAGAGC 
GAGCGCAAGT TTTTCCCTGG TTATGTCTTG GTACAGATGG TGATGGAAGA TGCTAGCTGG 
CATCTTGTTC GCAGCGTACC TCGCGTTATG GGGTTCATTG GCGGTACTTC TGACCGTCCT 
GCGCCAATCA GTGACAAAGA AGTGGATGCG ATTATGAATC GTCTCCAGCA GGTTGGTGAC 
AAACCCCGTC CTAAAACGCT GTTTGAACCA GGTGAAATGG TTCGTGTTAA CGACGGTCCA 
TTTGCTGACT TTAACGGTGT TGTTGAAGAA GTTGATTATG AGAAGAGTCG CCTGAAGGTG 
TCTGTCTCTA TCTTTGGCCG TGCAACGCCA GTTGAGCTGG ACTTTGCTCA GGTCGAAAAA 
GGCTAA 

 

Protein sequence

MSEAPKKRWY VVQAFSGFEG RVAQSLREHI KLHNMEELFG EVMVPTEEVV EIRGGQRRKS 
ERKFFPGYVL VQMVMEDASW HLVRSVPRVM GFIGGTSDRP APISDKEVDA IMNRLQQVGD 
KPRPKTLFEP GEMVRVNDGP FADFNGVVEE VDYEKSRLKV SVSIFGRATP VELDFAQVEK 
G