| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0165 |
|---|
| Symbol | hslU |
|---|
| ID | 8131065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 192843 |
|---|
| End bp | 194174 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644863434 |
|---|
| Product | ATP-dependent protease ATP-binding subunit HslU |
|---|
| Protein accession | YP_003015762 |
|---|
| Protein GI | 253686572 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAA TGACCCCGCG CGAGATAGTC AGCGAACTCG ACAGCTATAT CATCGGCCAG
CATAAAGCGA AACGCGCCGT TTCCATCGCG CTGCGTAACC GCTGGCGCCG TATGCAGTTG
GACGAAGCAC TCCGCCATGA AGTGACGCCT AAAAATATTC TCATGATCGG CCCGACCGGC
GTCGGTAAAA CCGAAATCGC TCGTCGTCTG GCGAAACTCG CCAATGCGCC GTTCATCAAA
GTGGAAGCAA CCAAGTTCAC CGAAGTGGGC TATGTCGGTA AAGAAGTTGA CTCCATCATC
CGCGATCTGA CGGATTCCGC GATCAAGATG GTGCGCCTCC AGTCCATCGA AAAAAACCGC
TTCCGTGCGG AAGAGATGGC AGAAGATCGC ATTCTGGACG TGCTGATTCC ACCAGCGAAA
AACAACTGGG GTCAGGCAGA AAGCACACCA GAACCTTCCG CTGCGCGTCA GGCATTCCGC
AAGAAACTGC GTGAAGGCCA GTTGGACGAC AAAGAGATCG AGATCGATCT GGCCGCCGCC
CCTGTTGGCG TCGAGATCAT GGCACCGCCG GGCATGGAAG AGATGACCAA CCAGCTCCAG
TCCATGTTCC AGAATCTGGC AGGCCAGAAG CAAAAAGCCC GCAAGATCAA AATCAAAGAC
GCGTTCAAGC TGCTGATAGA AGAAGAAGCC GCCAAGCTGG TGAACCCGGA AGAGCTGAAG
CAGCAGGCGA TTGAAGCCGT TGAGCAGCAC GGTATCGTGT TCATCGATGA GATCGACAAA
ATCTGTAAGC GTGGCGAAAG CTCCGGCCCG GATGTTTCCC GTGAAGGCGT TCAGCGCGAC
CTGCTGCCGC TGGTTGAAGG CTGCACTGTG TCTACTAAGC ACGGTATGGT CAAAACCGAC
CACATCCTGT TTATCGCCTC CGGCGCATTC CAGGTTGCCA GCCCGTCCGA TCTGATTCCA
GAATTGCAGG GACGTCTGCC GATTCGCGTG GAATTGCAGG CGCTGACGAC GGAAGATTTT
GAGCGTATCC TGACAGAGCC GAGCGCTTCG CTGACCGAAC AGTACAAAGC GCTGATGGCG
ACGGAAGGTG TGGATATTTC GTTCACCGCT GATGGTATCC GCCGCATTGC CGAAGCCGCC
TGGCAGGTAA ACGAAAGCAC CGAGAATATC GGCGCGCGCC GTCTGCATAC CGTGATGGAG
CGTCTGATCG AAGACGTTTC TTATGACGCC AGCGAAATGA ACGGTCAAAG CGTTACCATT
GACGCAGATT ACGTACGTAA TCATCTGGAT GAATTAGTAG CAGATGAAGA TCTGAGTCGA
TTTATCTTAT AA
|
|---|
| Protein sequence | MSEMTPREIV SELDSYIIGQ HKAKRAVSIA LRNRWRRMQL DEALRHEVTP KNILMIGPTG
VGKTEIARRL AKLANAPFIK VEATKFTEVG YVGKEVDSII RDLTDSAIKM VRLQSIEKNR
FRAEEMAEDR ILDVLIPPAK NNWGQAESTP EPSAARQAFR KKLREGQLDD KEIEIDLAAA
PVGVEIMAPP GMEEMTNQLQ SMFQNLAGQK QKARKIKIKD AFKLLIEEEA AKLVNPEELK
QQAIEAVEQH GIVFIDEIDK ICKRGESSGP DVSREGVQRD LLPLVEGCTV STKHGMVKTD
HILFIASGAF QVASPSDLIP ELQGRLPIRV ELQALTTEDF ERILTEPSAS LTEQYKALMA
TEGVDISFTA DGIRRIAEAA WQVNESTENI GARRLHTVME RLIEDVSYDA SEMNGQSVTI
DADYVRNHLD ELVADEDLSR FIL
|
|---|
| |