Gene PC1_0137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0137 
Symbol 
ID8131037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp163201 
End bp163725 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content53% 
IMG OID644863407 
Productputative stress resistance protein 
Protein accessionYP_003015735 
Protein GI253686545 
COG category[N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAGT TCGCAACCTT ATCTCTTGCT TCACTGCTTA TGCTAGGCAC TTTTACCGCC 
GTTGCAGCAG AAAGTGGAGA CGCCCCGGCG AGCGGCTGGC ATATCGATGA TTCCGCCACA
AAAGGGGTCT CCGGCCAGCA AGGTATGTTC GATGGCGTGA GGCTGACTGA GCAACAGCGT
CAGCAAATGC GTGATTTGAT GCACCAGAGC CGTCAGGACA AACCGGCGTT TAATGCCGAA
GATGTTAAAG CCATGCACAA GCTGGTGACG GCAGAAACGT TTGATGAAGC GGCGGTGCGA
GCGCAGATAA CCCGAATGAT GAGTGTGCAG ATTGAGCGTC AGATTCAGAT GACCCGAGTG
CGCAACCAAA TGTATAACCT GCTGACGCCG GCGCAGAAAG AGATCTTAGA TGTGAAGCAT
AAGCAACGCA TGAAAGAGAT GCAGCAGCAG ATATCCATGT TTAACCAGAT GGCCGCGCCA
GCACCAGGCA CGACAAACCA GACTGAGACA GAGAATCCCG AGTAG
 
Protein sequence
MQQFATLSLA SLLMLGTFTA VAAESGDAPA SGWHIDDSAT KGVSGQQGMF DGVRLTEQQR 
QQMRDLMHQS RQDKPAFNAE DVKAMHKLVT AETFDEAAVR AQITRMMSVQ IERQIQMTRV
RNQMYNLLTP AQKEILDVKH KQRMKEMQQQ ISMFNQMAAP APGTTNQTET ENPE