Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0128 |
Symbol | ugpC |
ID | 8131028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 154011 |
End bp | 155084 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644863398 |
Product | glycerol-3-phosphate transporter ATP-binding subunit |
Protein accession | YP_003015726 |
Protein GI | 253686536 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATGTT TAAAACTTCA GGCCGTCACC AAGTCTTACG ATGGCAAAAT ACAGATTATC CAACCCATCG ATCTGGATGT CGCTGACGGC GAATTCGTGG TGATGGTGGG TCCATCGGGC TGCGGTAAAT CGACACTGCT GCGCATGGTG GCAGGCCTCG AACGCACCAC CAGCGGCGAT ATCTATATTG ATAACCAGCG GGTCACCGAT CTGGAACCGA AAGATCGCGG TATTGCGATG GTGTTCCAGA ACTATGCGCT TTATCCCCAT ATGAACGTGT TCGACAACAT GGCTTACGGC CTGAAAATCC GTGGTTTCGG CAAGGCGCAG ATTCGTGAGC GTGTTGAAGA CGCGGCGCGC ATTCTGGAGC TGATGCCGCT GCTGCAACGC AAACCGCGTG AGCTATCAGG CGGCCAGCGT CAGCGCGTGG CGATGGGGCG GGCGATTGTA CGTGAACCGG CGGTGTTCCT ATTTGATGAA CCGTTGTCGA ATCTGGATGC CAAACTGCGC GTACAGATGC GGCTGGAATT GCAGCAACTG CACCAGCGCC TGAAAACCAC CAGTCTGTAC GTCACGCACG ATCAGGTTGA AGCCATGACG CTGGCGCAGC GCGTCATCGT CATGAACAAA GGGATCGCCG AGCAAATTGG TGCGCCTGCT GATATTTATC GCCGCCCGGC CTCGCTATTT GTGGCCAGCT TTATTGGTTC GCCGGCCATG AATCTGTGGT CGGGTCGCAT TAGCGATGAC GGCTGCCGCT TTGAAATCGG CGGCGACATC GCGCTGGCGC TGCCTGAGCC GAAGCCGCAG TGGCGCGGTA AAGCATTGAC GCTGGGGGTT CGACCGGAGC ATATTCAGCT GGCAACGCGC GAAACCGACG GTATTCCGTT GCAGATCGAC ACACTCGAAC TGTTGGGTGC GGACAATTTA GCGCACGGTA AGTGGGGCGG GCAGAACGTG ATCGCGCGAC TCTCTTATGA GCACTGTCCC GCCATCGGTT CGACGCTTTG GCTGCATTTA CCGACGTCAT CATGGCACCT GTTTGATTCG CAAAGCGGAT TACGGATGGA ATAA
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Protein sequence | MACLKLQAVT KSYDGKIQII QPIDLDVADG EFVVMVGPSG CGKSTLLRMV AGLERTTSGD IYIDNQRVTD LEPKDRGIAM VFQNYALYPH MNVFDNMAYG LKIRGFGKAQ IRERVEDAAR ILELMPLLQR KPRELSGGQR QRVAMGRAIV REPAVFLFDE PLSNLDAKLR VQMRLELQQL HQRLKTTSLY VTHDQVEAMT LAQRVIVMNK GIAEQIGAPA DIYRRPASLF VASFIGSPAM NLWSGRISDD GCRFEIGGDI ALALPEPKPQ WRGKALTLGV RPEHIQLATR ETDGIPLQID TLELLGADNL AHGKWGGQNV IARLSYEHCP AIGSTLWLHL PTSSWHLFDS QSGLRME
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