Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0086 |
Symbol | |
ID | 8130986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 111251 |
End bp | 112183 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644863356 |
Product | PfkB domain protein |
Protein accession | YP_003015684 |
Protein GI | 253686494 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACTA CTAACATTGC CGTAATCGGC GAATGCATGA TCGAACTGTC GCAGAAGGGC ACGGATCTTA ACCGTGGATT TGGCGGCGAT ACGCTGAACA CCGCCGTTTA CATTGCCCGT CAGGTAAACG CCGATAAGCT GGGCGTGCAT TACGTAACCG CTCTCGGCAC CGATAGCTTC AGTACCGAGA TGGTTGCCGC CTGGCAAAAA GAAGGGGTGA AAACCGACCT GATTCAGCGC CTGGACAACA AGCTGCCCGG TTTATACTTC ATTGAAACCG ACGCGAGCGG CGAGCGTACA TTCTACTATT GGCGTAATGA TGCCGCTGCC CGCTACTGGC TGGACAGCCC GGAAGCAGAA AAAATCGGTC AGTCGCTGGC GCACTTTGAC TATCTCTACC TGAGCGGTAT CAGTCTGGCG ATTCTGAACG CCGAAAGCCG CCAACGTCTC CTCGCCCTGC TGCGCGCCTG CCGCGCCAAC GGCGGTAAAG TGACTTTTGA TAATAACTAT CGCCCACGTT TGTGGCAGAG CAAAGAAGAA ACGCAACAGG CTTATACCGA CATCCTGTCC TGTACCGATA TTGCTTTCCT GACGCTGGAT GACGAAGACA TGTTGTGGGG CACGAAGCCA CTGGAAGCGG TACTGGAGCG GACACACGGT CTGGGCGTGA GCGAAGTAGT CATTAAACGC GGGGCTGATT CCTGCATCGT GTCAGAACGT GGACAAGCTC TGGTTGATGT TCCGGCGATC AAATTGCCAA AAGAGAAAGT GGTCGATACC ACCGCAGCAG GCGATTCCTT CAGCGCAGGC TATCTGTCAG TGCGCCTGAA TGGCGGCAGC ACGCAGGAAG CGGCACAGCG CGGCCACCTG ACGGCCAGCA CGGTCATTCA ATACCGTGGC GCGATTATCC CGCTTGAGGC AATGCCTGCA TAA
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Protein sequence | MTTTNIAVIG ECMIELSQKG TDLNRGFGGD TLNTAVYIAR QVNADKLGVH YVTALGTDSF STEMVAAWQK EGVKTDLIQR LDNKLPGLYF IETDASGERT FYYWRNDAAA RYWLDSPEAE KIGQSLAHFD YLYLSGISLA ILNAESRQRL LALLRACRAN GGKVTFDNNY RPRLWQSKEE TQQAYTDILS CTDIAFLTLD DEDMLWGTKP LEAVLERTHG LGVSEVVIKR GADSCIVSER GQALVDVPAI KLPKEKVVDT TAAGDSFSAG YLSVRLNGGS TQEAAQRGHL TASTVIQYRG AIIPLEAMPA
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