Gene PC1_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0086 
Symbol 
ID8130986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp111251 
End bp112183 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content56% 
IMG OID644863356 
ProductPfkB domain protein 
Protein accessionYP_003015684 
Protein GI253686494 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACTA CTAACATTGC CGTAATCGGC GAATGCATGA TCGAACTGTC GCAGAAGGGC 
ACGGATCTTA ACCGTGGATT TGGCGGCGAT ACGCTGAACA CCGCCGTTTA CATTGCCCGT
CAGGTAAACG CCGATAAGCT GGGCGTGCAT TACGTAACCG CTCTCGGCAC CGATAGCTTC
AGTACCGAGA TGGTTGCCGC CTGGCAAAAA GAAGGGGTGA AAACCGACCT GATTCAGCGC
CTGGACAACA AGCTGCCCGG TTTATACTTC ATTGAAACCG ACGCGAGCGG CGAGCGTACA
TTCTACTATT GGCGTAATGA TGCCGCTGCC CGCTACTGGC TGGACAGCCC GGAAGCAGAA
AAAATCGGTC AGTCGCTGGC GCACTTTGAC TATCTCTACC TGAGCGGTAT CAGTCTGGCG
ATTCTGAACG CCGAAAGCCG CCAACGTCTC CTCGCCCTGC TGCGCGCCTG CCGCGCCAAC
GGCGGTAAAG TGACTTTTGA TAATAACTAT CGCCCACGTT TGTGGCAGAG CAAAGAAGAA
ACGCAACAGG CTTATACCGA CATCCTGTCC TGTACCGATA TTGCTTTCCT GACGCTGGAT
GACGAAGACA TGTTGTGGGG CACGAAGCCA CTGGAAGCGG TACTGGAGCG GACACACGGT
CTGGGCGTGA GCGAAGTAGT CATTAAACGC GGGGCTGATT CCTGCATCGT GTCAGAACGT
GGACAAGCTC TGGTTGATGT TCCGGCGATC AAATTGCCAA AAGAGAAAGT GGTCGATACC
ACCGCAGCAG GCGATTCCTT CAGCGCAGGC TATCTGTCAG TGCGCCTGAA TGGCGGCAGC
ACGCAGGAAG CGGCACAGCG CGGCCACCTG ACGGCCAGCA CGGTCATTCA ATACCGTGGC
GCGATTATCC CGCTTGAGGC AATGCCTGCA TAA
 
Protein sequence
MTTTNIAVIG ECMIELSQKG TDLNRGFGGD TLNTAVYIAR QVNADKLGVH YVTALGTDSF 
STEMVAAWQK EGVKTDLIQR LDNKLPGLYF IETDASGERT FYYWRNDAAA RYWLDSPEAE
KIGQSLAHFD YLYLSGISLA ILNAESRQRL LALLRACRAN GGKVTFDNNY RPRLWQSKEE
TQQAYTDILS CTDIAFLTLD DEDMLWGTKP LEAVLERTHG LGVSEVVIKR GADSCIVSER
GQALVDVPAI KLPKEKVVDT TAAGDSFSAG YLSVRLNGGS TQEAAQRGHL TASTVIQYRG
AIIPLEAMPA