Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0074 |
Symbol | |
ID | 8130974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 94642 |
End bp | 95757 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644863344 |
Product | endo-1,4-D-glucanase |
Protein accession | YP_003015672 |
Protein GI | 253686482 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3405] Endoglucanase Y |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCACGCG TGCTGCGCTA CCTGATCCCC ACGTTGCTGT GGCTATGGGC TTCCCAGGCC ACCGCCGCCG TCTGCGACTG GCCAGCCTGG GAGCAGTACA AACAGCATTA CATCAGTGCG GAAGGACGGG TGATTGATAC CTCTACCCCC AACAAAATCA CCACGTCCGA AGGGCAAAGC TACGCCATGT TCTTTGCTCT GGTCGCCAAC GATCGCGTGA TGTTTGATCG GCTGCTGCAA TGGACGGAAA ACAACCTGTC CGCAGGCGAT TTACGTGCGC ATCTGCCCGC TTGGCTGTGG GGAGAAAACA AAGATAAGCA GTGGACGGTG CTGGATCCCA ACTCCGCTTC CGATGCCGAC CTGTGGATCG CCTACAGCCT GCTTGAGGCT GGTCGGCTGT GGAAAGAGGC GCGCTATCAG ACAGTTGGCA CCGCGTTGCT CGCCCGTATC GCCAAAGAAG AGGTCGTCAA TATTCCAGGA CTAGGCGTGA TGTTGCTGCC CGGCAAAGTA GGCTTCGCAG AGAAAGAGAG CTGGCGATTA AATCCCAGTT ACCTTCCGCC ACAGCTGCTG GCTCGCTTTG CGCCACTGAG CGAGACGTGG AAAGCGATGC AGCGCACCAC GCAACGCCTG CTGTTGGAAA CCGCGCCAAA AGGCTTCTCG CCTGATTGGG TCATCTGGCA AAAAGATAAG GGCTGGCAGC CTGATACCAC CAAACCCAAC ATCGGCAGCT ACGACGCCAT CCGCGTCTAT CTGTGGGCAG GGATGATGGC CGACAGCAGC AAAGGGAAAA CCGATCTGAT CAAACAGTTT CAGCCAATGG TTCAGCAGAC GATAGAGCAA GGTCTGCCGC CCGAAAAAAC CGACACCGCG ACAGGCACCG TCACTGGACA GGGATCGGTT GGATTTTCCG CTTCGCTGCT TCCGATGCTT TCTCGTCAGT CGGATGCACT GGCTACCCAA CGACAGCGGC TGGCCGACAA CCCTCCGGGG GATGATGCGT ATTTCTCCGC CTCTCTGACG CTCTTTGGTC AGGGATGGGA TCAGAAGCGC TATCGCTTCA CTTCACAAGG CCAACTTTTA CCGTCTCGGG GCAGCCAATG CACAACAACA CCGTAA
|
Protein sequence | MPRVLRYLIP TLLWLWASQA TAAVCDWPAW EQYKQHYISA EGRVIDTSTP NKITTSEGQS YAMFFALVAN DRVMFDRLLQ WTENNLSAGD LRAHLPAWLW GENKDKQWTV LDPNSASDAD LWIAYSLLEA GRLWKEARYQ TVGTALLARI AKEEVVNIPG LGVMLLPGKV GFAEKESWRL NPSYLPPQLL ARFAPLSETW KAMQRTTQRL LLETAPKGFS PDWVIWQKDK GWQPDTTKPN IGSYDAIRVY LWAGMMADSS KGKTDLIKQF QPMVQQTIEQ GLPPEKTDTA TGTVTGQGSV GFSASLLPML SRQSDALATQ RQRLADNPPG DDAYFSASLT LFGQGWDQKR YRFTSQGQLL PSRGSQCTTT P
|
| |