| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0070 |
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| Symbol | |
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| ID | 8130970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 87722 |
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| End bp | 88780 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644863340 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003015668 |
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| Protein GI | 253686478 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACA TGACGTACTC TTCGGCGCTG AATGCGGCGT TCTCCCGCAA CTGTGGCGTG
CTGGCGGCGG CGGCAACCGG ACTCGGCGAC TTTATCCATG ATAGTGGCGG TGATGCCGAT
CGTATCTTCG GCATCAGCGG CGTCGATCCC GAGCAGCTCG CCAGCCCGAC GCTCAGTCTG
GGGCTGGTGA ACTATTGCCG TGTGATGGAG GAAGCTGCGC GTAATTCAGG CGTTGATAAT
TTCGGTTTAC GCTACGGCAA GCAGTTTAAA CCGCAGTCAT TAGGTCTGAT CGGCTATATC
GGTTTATGTT CGGATACGCT GGAGCAGGCG CTGCACAATG TGGTGAAGGC GTTTCCCTGT
CATCAGCACG ACACGCTGAC GCGCATGGTG GATAAAGGCG ACTGCTGGCG GCTGGATTAT
CAGGTTCGGC ACGGCGCCAT TCTGCATCGT CGGCAGGATG CCGAACTGAC GCTCGGCATG
TTTCTTAACC TGATTCGTCA TGTTTTGGGC AAGCATTGGG CACCGCGCGA AGTGCATTTT
GAGCATCCAC GCCCGGAAAT GTGGCATGAG CACTGCAAGG TGTTCGATGC GCCGGTTTAC
TTCGATCAAC CCTACAATTC CCTGCTTATC CCCAAGCATC AGTTGGTCCG CACCATGCCG
GATCGCGACA TGACATTGCT GCTGGTGATG CAAGATGCGA TTCGTCGTCT GAACGAGACG
TCACCGCAGC AAAGTATTGT CGAACAGGTG CGTACGCAGG TTCATCTGTT ATTGATGCAG
AAAGAGCCGA CGCTGGAAGA GGTGGCGGAG AAGGTGGGGT TGTCCAGTTG GTCGCTCCAG
CGTCGTCTGC GGGAGGAAGG ACTCAGCTTC TCTCTGCTGG TAGACAAACT GCGCTGTGAA
ATGGCGACAC ACTATCTTCA ACAGAAGCAA CTACCGATTT CGGAAATGGC GCTGTTGCTC
GGCTATTCCG AGGTGAGCGC CTTTTCCCGC GCATTCCGTC GCTGGTTTGG CATTAGCCCG
CGCCAGTGGC GTAAAGGTGA AGCCCTCAAT CTTTCCTGA
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| Protein sequence | MENMTYSSAL NAAFSRNCGV LAAAATGLGD FIHDSGGDAD RIFGISGVDP EQLASPTLSL
GLVNYCRVME EAARNSGVDN FGLRYGKQFK PQSLGLIGYI GLCSDTLEQA LHNVVKAFPC
HQHDTLTRMV DKGDCWRLDY QVRHGAILHR RQDAELTLGM FLNLIRHVLG KHWAPREVHF
EHPRPEMWHE HCKVFDAPVY FDQPYNSLLI PKHQLVRTMP DRDMTLLLVM QDAIRRLNET
SPQQSIVEQV RTQVHLLLMQ KEPTLEEVAE KVGLSSWSLQ RRLREEGLSF SLLVDKLRCE
MATHYLQQKQ LPISEMALLL GYSEVSAFSR AFRRWFGISP RQWRKGEALN LS
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