Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0062 |
Symbol | |
ID | 8130962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 73711 |
End bp | 75489 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644863332 |
Product | gamma-glutamyltransferase |
Protein accession | YP_003015660 |
Protein GI | 253686470 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0405] Gamma-glutamyltransferase |
TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAA AAAACACAAC ATCGGGAAAA TGGTTGCTGT CGCTGAGCGT GGCGGCGCTG CTGGTGAGTG GAGCTGTGCA GGCGGCGTCA GCCCCTGCGG TAGAAGCGAA AAACGGTATG GTGGTTAGTT CACAGTATCT GGCTTCGCAG ATTGGCGTCG ATATCATGAA GATGGGCGGC AACGCGATTG ATGCCGCGGT AGCTGTGGGC TATGCGCAGG CGGTGGTCAA TCCCTGCTGT GGCAACATCG GCGGTGGCGG GTTTATGACG CTGCATCTGG CCGATGGAAA AGACACCTTT ATCAACTTCC GTGAAACGGC ACCGGCGGCG GCCAGCGCCA ACATGTACCT GAACGCGGAT GGGAGTGTGA AAAAGGATGC GAGCCTATAT GGCTATCTGG CCGCTGGCGT ACCGGGTACG GTGCTGGGGC TGGATACCGC GCTACAAAAA TACGGCAAAT TGACGCGTGA ACAGGTGATG GCACCAGCGA TTAAACTGGC GCGTGAAGGT TTTGAGCTTA CGCGGGCAGA TACCGATATT TTGGATACTA CGGTAAAACG CTTCAAAGCT GACCCTGAAG CGGCGCGCAT TTTCCTGCGT CCTGACGGTA GCCCGTTGCA GCCCGGTGAT AAGCTGGTGC AAACCGATCT GGCGAATACC TTGGCAGCAA TTGCTGCGAA AGGGCCGGAT GCCTTCTACA AGGGGGAGAT TCCACAGGCG GTGGAGAAGG CGGCAAAGCA GGGCGGCGGC ATTTTGACGG CGGCTGATTT TGCCGATTAC CGTATTACCG AAACGGCACC GGTAACCTGC AACTATCGTG GCTATCAGTT TGTCTCTTCG CCACCACCTA GCTCCGGTGG CGTCACGATG TGTGAAATCC TCAATATTGT CGAAGGCTAC GACATGAAAT CGACGGGCTT TAATTCTGCC GCCACCGTTC ATGTGCTGAC GGAAGCGATG CGTCACGCTT ACATGGATCG CAATACGTAT CTCGGCGATC CCGCGTTTGT CAGCAACCCT GTCGAGCGCT TGTTGAGCAA AGATTATGCC GCCGAAATCC GCAAACAAAT CGAGCCGGAG AACGCGACGC CGTCCAAAAA CGTGCAGCCG GGGGTGGGTC CGCACGAGCG ACCGGAAACC ACGCACTACT CCATCGTGGA TAATCAGGGC AATGCGGTGT CCACCACGTA TACCGTGAAC GGGCGTTTTG GTTCGGTGGT GATTGCGCCG GGAACAGGTT TCTTCCTCAA TAACGAAATG GATGACTTTA CCGTGAAAGT TGGCGAGAAA AACCTGTATG GGTTGGTGCA AGGAGAGCGT AATTCGATCG CCCCCGGTAA GCGCCCACTT TCGTCCATGA GCCCGTCATT GGTGACGAAA GACGGCAAGG TCTTCATGGT GCTCGGTTCG CCCGGTGGTT CGCGCATTAT CACCATCACG CTGCAAACGG CACTGAATAT CATCGACCAC GGCATGGCGC CGCAGGAAGC GGTAGACGCA CCGCGCATCC ATCACCAGTG GTTGCCGGAT GAGGTGTATT ACGAACAGCG CGGGCTGTCT GCCGATACGC TGAACCTGCT GAAGCAGCGC GGCTACAAGA TGGTGGAACA AACGCCTTGG GGTGCAGCGG AGCTGATTCT GGTCGGCTTA CCGGGTGCGG CGGGCGTGAC ACCTGCGGAT TCGGGCAATG ACTCAGCGGT ATCCGGCAAA GTACGTGAAG GTTACCTGTA CGGCGCCAAT GATATCCGCC GCCCGGCCGG GGCAGCGATA GGGTATTGA
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Protein sequence | MKTKNTTSGK WLLSLSVAAL LVSGAVQAAS APAVEAKNGM VVSSQYLASQ IGVDIMKMGG NAIDAAVAVG YAQAVVNPCC GNIGGGGFMT LHLADGKDTF INFRETAPAA ASANMYLNAD GSVKKDASLY GYLAAGVPGT VLGLDTALQK YGKLTREQVM APAIKLAREG FELTRADTDI LDTTVKRFKA DPEAARIFLR PDGSPLQPGD KLVQTDLANT LAAIAAKGPD AFYKGEIPQA VEKAAKQGGG ILTAADFADY RITETAPVTC NYRGYQFVSS PPPSSGGVTM CEILNIVEGY DMKSTGFNSA ATVHVLTEAM RHAYMDRNTY LGDPAFVSNP VERLLSKDYA AEIRKQIEPE NATPSKNVQP GVGPHERPET THYSIVDNQG NAVSTTYTVN GRFGSVVIAP GTGFFLNNEM DDFTVKVGEK NLYGLVQGER NSIAPGKRPL SSMSPSLVTK DGKVFMVLGS PGGSRIITIT LQTALNIIDH GMAPQEAVDA PRIHHQWLPD EVYYEQRGLS ADTLNLLKQR GYKMVEQTPW GAAELILVGL PGAAGVTPAD SGNDSAVSGK VREGYLYGAN DIRRPAGAAI GY
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