Gene PC1_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0062 
Symbol 
ID8130962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp73711 
End bp75489 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content57% 
IMG OID644863332 
Productgamma-glutamyltransferase 
Protein accessionYP_003015660 
Protein GI253686470 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0405] Gamma-glutamyltransferase 
TIGRFAM ID[TIGR00066] gamma-glutamyltranspeptidase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA AAAACACAAC ATCGGGAAAA TGGTTGCTGT CGCTGAGCGT GGCGGCGCTG 
CTGGTGAGTG GAGCTGTGCA GGCGGCGTCA GCCCCTGCGG TAGAAGCGAA AAACGGTATG
GTGGTTAGTT CACAGTATCT GGCTTCGCAG ATTGGCGTCG ATATCATGAA GATGGGCGGC
AACGCGATTG ATGCCGCGGT AGCTGTGGGC TATGCGCAGG CGGTGGTCAA TCCCTGCTGT
GGCAACATCG GCGGTGGCGG GTTTATGACG CTGCATCTGG CCGATGGAAA AGACACCTTT
ATCAACTTCC GTGAAACGGC ACCGGCGGCG GCCAGCGCCA ACATGTACCT GAACGCGGAT
GGGAGTGTGA AAAAGGATGC GAGCCTATAT GGCTATCTGG CCGCTGGCGT ACCGGGTACG
GTGCTGGGGC TGGATACCGC GCTACAAAAA TACGGCAAAT TGACGCGTGA ACAGGTGATG
GCACCAGCGA TTAAACTGGC GCGTGAAGGT TTTGAGCTTA CGCGGGCAGA TACCGATATT
TTGGATACTA CGGTAAAACG CTTCAAAGCT GACCCTGAAG CGGCGCGCAT TTTCCTGCGT
CCTGACGGTA GCCCGTTGCA GCCCGGTGAT AAGCTGGTGC AAACCGATCT GGCGAATACC
TTGGCAGCAA TTGCTGCGAA AGGGCCGGAT GCCTTCTACA AGGGGGAGAT TCCACAGGCG
GTGGAGAAGG CGGCAAAGCA GGGCGGCGGC ATTTTGACGG CGGCTGATTT TGCCGATTAC
CGTATTACCG AAACGGCACC GGTAACCTGC AACTATCGTG GCTATCAGTT TGTCTCTTCG
CCACCACCTA GCTCCGGTGG CGTCACGATG TGTGAAATCC TCAATATTGT CGAAGGCTAC
GACATGAAAT CGACGGGCTT TAATTCTGCC GCCACCGTTC ATGTGCTGAC GGAAGCGATG
CGTCACGCTT ACATGGATCG CAATACGTAT CTCGGCGATC CCGCGTTTGT CAGCAACCCT
GTCGAGCGCT TGTTGAGCAA AGATTATGCC GCCGAAATCC GCAAACAAAT CGAGCCGGAG
AACGCGACGC CGTCCAAAAA CGTGCAGCCG GGGGTGGGTC CGCACGAGCG ACCGGAAACC
ACGCACTACT CCATCGTGGA TAATCAGGGC AATGCGGTGT CCACCACGTA TACCGTGAAC
GGGCGTTTTG GTTCGGTGGT GATTGCGCCG GGAACAGGTT TCTTCCTCAA TAACGAAATG
GATGACTTTA CCGTGAAAGT TGGCGAGAAA AACCTGTATG GGTTGGTGCA AGGAGAGCGT
AATTCGATCG CCCCCGGTAA GCGCCCACTT TCGTCCATGA GCCCGTCATT GGTGACGAAA
GACGGCAAGG TCTTCATGGT GCTCGGTTCG CCCGGTGGTT CGCGCATTAT CACCATCACG
CTGCAAACGG CACTGAATAT CATCGACCAC GGCATGGCGC CGCAGGAAGC GGTAGACGCA
CCGCGCATCC ATCACCAGTG GTTGCCGGAT GAGGTGTATT ACGAACAGCG CGGGCTGTCT
GCCGATACGC TGAACCTGCT GAAGCAGCGC GGCTACAAGA TGGTGGAACA AACGCCTTGG
GGTGCAGCGG AGCTGATTCT GGTCGGCTTA CCGGGTGCGG CGGGCGTGAC ACCTGCGGAT
TCGGGCAATG ACTCAGCGGT ATCCGGCAAA GTACGTGAAG GTTACCTGTA CGGCGCCAAT
GATATCCGCC GCCCGGCCGG GGCAGCGATA GGGTATTGA
 
Protein sequence
MKTKNTTSGK WLLSLSVAAL LVSGAVQAAS APAVEAKNGM VVSSQYLASQ IGVDIMKMGG 
NAIDAAVAVG YAQAVVNPCC GNIGGGGFMT LHLADGKDTF INFRETAPAA ASANMYLNAD
GSVKKDASLY GYLAAGVPGT VLGLDTALQK YGKLTREQVM APAIKLAREG FELTRADTDI
LDTTVKRFKA DPEAARIFLR PDGSPLQPGD KLVQTDLANT LAAIAAKGPD AFYKGEIPQA
VEKAAKQGGG ILTAADFADY RITETAPVTC NYRGYQFVSS PPPSSGGVTM CEILNIVEGY
DMKSTGFNSA ATVHVLTEAM RHAYMDRNTY LGDPAFVSNP VERLLSKDYA AEIRKQIEPE
NATPSKNVQP GVGPHERPET THYSIVDNQG NAVSTTYTVN GRFGSVVIAP GTGFFLNNEM
DDFTVKVGEK NLYGLVQGER NSIAPGKRPL SSMSPSLVTK DGKVFMVLGS PGGSRIITIT
LQTALNIIDH GMAPQEAVDA PRIHHQWLPD EVYYEQRGLS ADTLNLLKQR GYKMVEQTPW
GAAELILVGL PGAAGVTPAD SGNDSAVSGK VREGYLYGAN DIRRPAGAAI GY