Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0060 |
Symbol | |
ID | 8130960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 70969 |
End bp | 71883 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644863330 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003015658 |
Protein GI | 253686468 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCGTT CACAAAATTT ACGTCACAAT GTCATTAATC AGATTATCGA TGATATGGCC CGTGGTCATA TTCCCTCGCC TCTGCCATCG CAAAATGCGC TGGCAGAAAT GTATAACATC AGCCGCACAA CGGTGCGTCA TATTCTGGTT CATCTGTGTG ACTGCGGTGT GCTTATACAG GTTGGCAGCG ATTATGTGAT TGCCCGAAAA CCCGACCACG ACGATGGGTT CACCTGTATT ACCGCCCCGA TGGCTGAGCA AAACCGCATT TTCGAGCAGG CATTTTTCAC CATGATTAAC CAGCGTCTGC TACGTGTGGG AGAGACATTT TCAGAGCTAC AGCTCGCACG GGATGCGGGT GTAAGTCCGG TAGTCGTACG TGAATATCTT TTAAAATTCG GGCGTTACAA TCTGATTCAG AACGAAAAGC GTGGGCAGTG GAGTATGAAA GAGTTCGATC AGGCTTACGC GGAACAGCTG TTTGAATTAC GGGAAATGTT GGAGACACAT GCTCTGCAAC ACTTCCTCAA TCTGCCGGAC GATGACCCCC GTTGGCTAGA GGCTAAAACC TTGCTGGAGC GCCATCGCAT GTTACGTGAC AGCATTGGCA ACAGTTTTCG CATGTTCTCG CAGCTCGATC GTAGTTTTCA TGCGCTTTTA CTTTCCGCTG CCGAAAATGT CTTTTTTGAT CAGTCTCTTG AAATCATCTC TGTGATATTT CATTTCCACT ACCAGTGGGA TGAAAGCGAT CTCAAACAGC GCAATATCAT CGCGATTGAC GAGCACATGA CCATTCTCAG CGCACTGATT TGTCGAAGCG ATCTGGATGC CACGCTGGCG CTACGTAACC ATTTGAATTC AGCTAAACAA TCGATGATTC GCTCAATTAA TCAAACAGTG CGAGCTGACT ATTAA
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Protein sequence | MSRSQNLRHN VINQIIDDMA RGHIPSPLPS QNALAEMYNI SRTTVRHILV HLCDCGVLIQ VGSDYVIARK PDHDDGFTCI TAPMAEQNRI FEQAFFTMIN QRLLRVGETF SELQLARDAG VSPVVVREYL LKFGRYNLIQ NEKRGQWSMK EFDQAYAEQL FELREMLETH ALQHFLNLPD DDPRWLEAKT LLERHRMLRD SIGNSFRMFS QLDRSFHALL LSAAENVFFD QSLEIISVIF HFHYQWDESD LKQRNIIAID EHMTILSALI CRSDLDATLA LRNHLNSAKQ SMIRSINQTV RADY
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