Gene PC1_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0060 
Symbol 
ID8130960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp70969 
End bp71883 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content47% 
IMG OID644863330 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003015658 
Protein GI253686468 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGTT CACAAAATTT ACGTCACAAT GTCATTAATC AGATTATCGA TGATATGGCC 
CGTGGTCATA TTCCCTCGCC TCTGCCATCG CAAAATGCGC TGGCAGAAAT GTATAACATC
AGCCGCACAA CGGTGCGTCA TATTCTGGTT CATCTGTGTG ACTGCGGTGT GCTTATACAG
GTTGGCAGCG ATTATGTGAT TGCCCGAAAA CCCGACCACG ACGATGGGTT CACCTGTATT
ACCGCCCCGA TGGCTGAGCA AAACCGCATT TTCGAGCAGG CATTTTTCAC CATGATTAAC
CAGCGTCTGC TACGTGTGGG AGAGACATTT TCAGAGCTAC AGCTCGCACG GGATGCGGGT
GTAAGTCCGG TAGTCGTACG TGAATATCTT TTAAAATTCG GGCGTTACAA TCTGATTCAG
AACGAAAAGC GTGGGCAGTG GAGTATGAAA GAGTTCGATC AGGCTTACGC GGAACAGCTG
TTTGAATTAC GGGAAATGTT GGAGACACAT GCTCTGCAAC ACTTCCTCAA TCTGCCGGAC
GATGACCCCC GTTGGCTAGA GGCTAAAACC TTGCTGGAGC GCCATCGCAT GTTACGTGAC
AGCATTGGCA ACAGTTTTCG CATGTTCTCG CAGCTCGATC GTAGTTTTCA TGCGCTTTTA
CTTTCCGCTG CCGAAAATGT CTTTTTTGAT CAGTCTCTTG AAATCATCTC TGTGATATTT
CATTTCCACT ACCAGTGGGA TGAAAGCGAT CTCAAACAGC GCAATATCAT CGCGATTGAC
GAGCACATGA CCATTCTCAG CGCACTGATT TGTCGAAGCG ATCTGGATGC CACGCTGGCG
CTACGTAACC ATTTGAATTC AGCTAAACAA TCGATGATTC GCTCAATTAA TCAAACAGTG
CGAGCTGACT ATTAA
 
Protein sequence
MSRSQNLRHN VINQIIDDMA RGHIPSPLPS QNALAEMYNI SRTTVRHILV HLCDCGVLIQ 
VGSDYVIARK PDHDDGFTCI TAPMAEQNRI FEQAFFTMIN QRLLRVGETF SELQLARDAG
VSPVVVREYL LKFGRYNLIQ NEKRGQWSMK EFDQAYAEQL FELREMLETH ALQHFLNLPD
DDPRWLEAKT LLERHRMLRD SIGNSFRMFS QLDRSFHALL LSAAENVFFD QSLEIISVIF
HFHYQWDESD LKQRNIIAID EHMTILSALI CRSDLDATLA LRNHLNSAKQ SMIRSINQTV
RADY