Gene PC1_0059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0059 
Symbol 
ID8130959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp69804 
End bp70826 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content50% 
IMG OID644863329 
ProductAlcohol dehydrogenase GroES domain protein 
Protein accessionYP_003015657 
Protein GI253686467 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACAA TGAATACATT GATTTGCCAG GAACCAAAAA AACTTATCTG GAAAAAACGT 
GAAATACCTA TTCCGGGTGA AGGTGAAACA TTAATTAAAA TTAAGTCTGT GGGTATTTGT 
GGCACAGATA TTCATGCCTG GGGAGGGAAT CAACCCTTTT TTAGCTACCC ACGCGTATTA 
GGCCACGAAA TATGTGGAGA GGTTGTCGAT ACGGGCAAAA ATGTACATCA ATTTAAAAAA 
GGCCAGCAGG TTGCCGTCAT TCCCTATGTC GCCTGTCAGC AATGTCCTGC CTGCAAGAGC 
GGCCGTACCA ACTGCTGCGA GAAAATTTCA GTGATTGGTG TACATCAGGA TGGCGGATTT 
AGCGAATATC TGGCGGTGCC CGCCACAAAC GTATTGCTTG CAGAAGGGAT CGACCCACAG 
GCGGCGGCGT TAATCGAGCC CTACGCCATT AGTGCGCACG CCGTTCGTCG GGCAAAGGTG 
CTACAAGGTG AACAGGTGCT GGTCGTCGGT GCCGGACCGA TTGGCCTTGG CGCAGCAGCC 
ATCGCCAAAG CAGACGGCGC TCACGTGGTT GTCGCAGACA CCAGTGCAGC CCGCCGCGAG 
CACGTTATTG CCCACCTGAA TCTTTCGGTC GTCGATCCCT CAGCCGAGGA TTTTGAGGCC 
CAGCTACGCG CCGAATTTGG CGGTTCGCTG GCAGAAAAAG TCATCGATGC CACGGGAAAT 
CAGCATGCGA TGAACAACAC CATTAACCTG ATCCGCCACG GTGGCAGCAT CGTGTTTGTC 
GGTCTGTTTA AAGGTGATTT ACAGTTCTCC GATCCTGACT TCCATAAGAA AGAGACCACG 
ATGATGGGCA GTCGTAACGC CACACCGGAA GATTTCTCCA AGGTAGGACG TTTGATGTCT 
GAAGGTAAAC TCACCGCAGA AATGATGCTG ACGCACCGTT ATTCCTTTTC CACACTGGCT 
GACATCTATG AAAAGGATGT CATTAACAAC CGTGAGCTGA TCAAAGGCGT CATCACATTT 
TAA
 
Protein sequence
MSTMNTLICQ EPKKLIWKKR EIPIPGEGET LIKIKSVGIC GTDIHAWGGN QPFFSYPRVL 
GHEICGEVVD TGKNVHQFKK GQQVAVIPYV ACQQCPACKS GRTNCCEKIS VIGVHQDGGF 
SEYLAVPATN VLLAEGIDPQ AAALIEPYAI SAHAVRRAKV LQGEQVLVVG AGPIGLGAAA 
IAKADGAHVV VADTSAARRE HVIAHLNLSV VDPSAEDFEA QLRAEFGGSL AEKVIDATGN 
QHAMNNTINL IRHGGSIVFV GLFKGDLQFS DPDFHKKETT MMGSRNATPE DFSKVGRLMS 
EGKLTAEMML THRYSFSTLA DIYEKDVINN RELIKGVITF