| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0046 |
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| Symbol | |
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| ID | 8130946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 52699 |
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| End bp | 53601 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644863317 |
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| Product | dipeptide transporter |
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| Protein accession | YP_003015645 |
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| Protein GI | 253686455 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAG TCACTGAACC TGTTGTAAAT AGCGCACCGA AGCCGATGAC CCCGCTACAG
GAATTCTGGC ACTATTTTAA ACGTAACAAA GGGGCGGTCG TTGGCATGGT GTATGTCGTG
CTGATGCTGG TGATCGCCAT TGGCGCCAAC GTACTGGCAC CACATGCGCC CGCTGAGCAG
TTCCGCGATG CGCTGCTGCG TCCGCCGGTC TGGCAAGAGG GCGGAAGCTG GCAGTTTATT
CTGGGAACGG ACGATGTTGG GCGCGATGTC CTGTCCCGTC TGATGTATGG CGCACGCCTG
TCGCTGCTGG TCGGCTGTCT GGTGGTGGCG CTGTCGCTGG TGCTGGGCGT GATCTTTGGG
CTGCTGGCTG GGTATTTCGG CGGTGTGGTT GATGCGCTCA TCATGCGTAT CGTCGATATC
ATGCTGGCGC TGCCAAGCCT GCTGCTGGCG CTGGTGCTGG TGGCTGTCTT CGGGCCTTCG
ATTGTGAACG CCTCGCTGGC GCTGACCTTC GTAGCATTAC CGCACTACGT TCGTTTGACC
CGTGCGGCGG TGCTGGTGGA GGTTAACCGC GATTACGTCA CGGCTTCACG CGTGGCGGGA
GCCGGTTCGG CGCGCCAGAT GTTCGTCAAC ATTCTTCCTA ACTGTCTGGC GCCGCTGATT
GTGCAGGCGT CTCTCGGTTT TTCTAACGCC ATTCTTGATA TGGCTGCTTT GGGTTTCCTC
GGTATGGGCG CACAGCCGCC AACGCCAGAA TGGGGCACCA TGCTGTCGGA CGTTTTGCAG
TTTGCGCAAA GCGCCTGGTG GGTGGTGACG TTCCCCGGTC TGGCAATCTT ACTGACGGTA
TTGGCGTTTA ACCTGATGGG GGACGGCTTG CGTGATGCTC TCGACCCCAA ACTCAAGCAG
TAA
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| Protein sequence | MTQVTEPVVN SAPKPMTPLQ EFWHYFKRNK GAVVGMVYVV LMLVIAIGAN VLAPHAPAEQ
FRDALLRPPV WQEGGSWQFI LGTDDVGRDV LSRLMYGARL SLLVGCLVVA LSLVLGVIFG
LLAGYFGGVV DALIMRIVDI MLALPSLLLA LVLVAVFGPS IVNASLALTF VALPHYVRLT
RAAVLVEVNR DYVTASRVAG AGSARQMFVN ILPNCLAPLI VQASLGFSNA ILDMAALGFL
GMGAQPPTPE WGTMLSDVLQ FAQSAWWVVT FPGLAILLTV LAFNLMGDGL RDALDPKLKQ
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