| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0045 |
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| Symbol | |
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| ID | 8130945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 51666 |
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| End bp | 52685 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644863316 |
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| Product | dipeptide transporter permease DppB |
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| Protein accession | YP_003015644 |
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| Protein GI | 253686454 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCAGT TCATACTCCG GCGTTTGGGG CTTGTTATCC CAACGTTTAT TGGTATCACC
CTGTTGACCT TCGCATTCGT GCACATGATT CCGGGCGATC CGGTGATGAT CATGGCGGGG
GAACGCGGTA TTTCCGCCGA GCGCCATGCG CAATTGCTAG CTGAAATGGG GCTGGACAAG
CCGCTTTGGC AGCAATACAT CCACTATATT GGTGGTGTGT TGCAGGGCGA TCTGGGGATT
TCTCTCAAGA GCCGCATCCC CGTGTGGGAA GAATTTGTGC CTCGCTTTAA GGCGACGCTG
GAACTGGGTA TCTGCGCGAT GTTGTTTGCT ATCGCGGTTG GGATCCCGGT TGGTGTGCTG
GCTGCGGTTA AACGCGGCTC CATCTTCGAT CATACGTCTG TTGGCCTGGC GCTGACGGGT
TACTCCATGC CTATCTTCTG GTGGGGCATG ATGCTGATCA TGCTGGTTTC CGTCCAGCTC
AACCTGACGC CCGTTTCGGG GCGCATTAGC GACACGATTT TCCTCGATGA CAGCATGCCG
CTGACTGGCT TTATGCTGAT CGATACCCTG TTCTGGGGTG AAAAAGGCGA CTTTATCGAC
GCGGTTGAAC ACATGATTCT GCCTGCCATC GTGCTGGGTA CCATTCCACT GGCGGTGATT
GTGCGTATGA CGCGCTCCGC GATGCTGGAA GTGCTAGGCG AGGATTACAT TCGTACCGCC
CGCGCCAAAG GGTTGAGTCG CCTGCGTGTG ATTGTGGTGC ACGCGTTACG TAATGCGATG
TTGCCGGTCG TGACGGTGAT TGGCCTGCAG GTCGGCACCA TGTTGGCTGG AGCGATCCTG
ACGGAAACCA TTTTCTCCTG GCCGGGGCTG GGACGGTGGT TGATCGATGC GTTGCAGCGT
CGTGATTATC CGGTAGTTCA GGGCGGCGTG TTGCTGGTAG CAACCATGAT CATTCTGGTT
AACCTGCTGG TGGATGTGCT CTACGGTGTG GTTAACCCAC GCATCCGTCA CAAGAAATAA
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| Protein sequence | MLQFILRRLG LVIPTFIGIT LLTFAFVHMI PGDPVMIMAG ERGISAERHA QLLAEMGLDK
PLWQQYIHYI GGVLQGDLGI SLKSRIPVWE EFVPRFKATL ELGICAMLFA IAVGIPVGVL
AAVKRGSIFD HTSVGLALTG YSMPIFWWGM MLIMLVSVQL NLTPVSGRIS DTIFLDDSMP
LTGFMLIDTL FWGEKGDFID AVEHMILPAI VLGTIPLAVI VRMTRSAMLE VLGEDYIRTA
RAKGLSRLRV IVVHALRNAM LPVVTVIGLQ VGTMLAGAIL TETIFSWPGL GRWLIDALQR
RDYPVVQGGV LLVATMIILV NLLVDVLYGV VNPRIRHKK
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