| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0038 |
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| Symbol | |
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| ID | 8130938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 43093 |
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| End bp | 44721 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644863309 |
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| Product | sensory histidine kinase DcuS |
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| Protein accession | YP_003015637 |
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| Protein GI | 253686447 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAAGA AAAAGGCACC GCTAAAGCTG GGAACATCGG TGTTTCTGAT GGTGTCAGTT
GTGCTTGGCG CGGTGTTGCT GGTGGTCTAT TCCTTGCTGT TTTTTCGCAT TAATCAGCTA
TCAGAAGATC ATCTGCGAGA AAAAGCCTTT GCCATTGCTC GCACATTTGC CGCCTCTCCC
GTCGTTATTG ATGAACTTAA AGGCATTGGC CGACCTGAGG AAGTGCAGAT TGCGGCGGAG
ACGATTCGTC AGCGCAATCA ACTGCTTTTC GTCACGGTAA CTGACATGGA TGCGGTGCGC
CATAGCCATC CTGAGCCGGA AAGAATTGGC GAGCATTTCG CCGGTCGGGA TATCTACCCG
GCGCTGCTGG GTATGGAAAA TACCGCCATT AATCGGGGAA CGCTCGATCC CGCGCTGCGG
GTCTTTACGC CGGTTTTCGA CAGCAACCAT AAGCAGGTTG GCGTCGTCGC GCTGGGGATT
GCCTTAACCA GCGTGCAGAA GGTGATTAGC GATAACCGCT GGATGATCCC CTGGACGCTA
CTGGCTGGGG CGCTGGTTGG CTGGCTCGGT ACGTTGATTT TGGTGAAGGT GCTCAAGCGC
ATTATGCTGG GATTCGAGCC GTTTGAGATC TCGAATCTGT TTGAACAGCG CAACGCGATG
CTCAAACACA TCAAAGAAGG CGTTATCGCG GTCGACCAGA ATGGGCGAAT TACGGTAATT
AATGATGAGG CGCGACGGCT GTTCCGGCAG AATAAGCCGC AGGGCAGCGA AACGCCGTCG
TCGAAGCCTG CCGAGCGCGT CAGTGAGCAG TGGCTGGAAC ATCTGCACCT GAAACAGGTG
CTGGAGAGCG GCACACCACG GCGCGATGAA GAGATTAACT TTAACGGCCA CCTGCTGCTG
ACCAACACCG TTCCGGTTTT TGTGAAGGGC GATATTATCG GTGCGATTGC GACATTCCGT
GATAAAACGG AAATCAGCCA ACTGCTGCAA CGGTTGAGTG GGATGTCGTA CTATGCGGAT
GCGCTACGGG CGCAGTCGCA CGAGTTTATG AACAAGCTGC ACGTCATTCT GGGGATGCTG
CACTTAAAGT ATTACTCGCA GCTGGAAGAT TATATCCTGA AGACGGCCAA TAATTATCAG
GCGGAAATTG GTTCAATTAT TCGTAAAGTG AAATCGCCAG TGATTGCCGG CTTCCTGTTG
GGTAAAATCA ACCGCGCGCG CGATCTCGGC ATTACGCTCT CCATCAGTGA GGAGAGTCTG
CTGCCAGATA CCGATGATGT CGATGCCACC AATGAATTGA TTACCGTATT GGGTAATCTG
ATTGAGAATG CGATGGACGC GATTGATGGG CAGGAAAACT GTGAAATCAG CGTGAGTTTC
CATCATCAGA ATGGCCGCCT TCACTGTACC GTGGGGGATG ACGGTCCCGG CATTTCGCCG
GAGAGTCAGG CGCGCATTTA TGAACAGGGA TTCTCTACCA AAGGCAGCGG GCGCGGTATA
GGCCTGTTCC TGACCAAACA GAGTCTGGAG AAGATTGGCG GCACTATCGA GTTTGAATCA
GAACCTGAGG TGTACACCCA GTTTTTCGTT ACTATTCCTT ATCAAGCAAG GCTGTTTGAC
CATGATTAA
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| Protein sequence | MGKKKAPLKL GTSVFLMVSV VLGAVLLVVY SLLFFRINQL SEDHLREKAF AIARTFAASP
VVIDELKGIG RPEEVQIAAE TIRQRNQLLF VTVTDMDAVR HSHPEPERIG EHFAGRDIYP
ALLGMENTAI NRGTLDPALR VFTPVFDSNH KQVGVVALGI ALTSVQKVIS DNRWMIPWTL
LAGALVGWLG TLILVKVLKR IMLGFEPFEI SNLFEQRNAM LKHIKEGVIA VDQNGRITVI
NDEARRLFRQ NKPQGSETPS SKPAERVSEQ WLEHLHLKQV LESGTPRRDE EINFNGHLLL
TNTVPVFVKG DIIGAIATFR DKTEISQLLQ RLSGMSYYAD ALRAQSHEFM NKLHVILGML
HLKYYSQLED YILKTANNYQ AEIGSIIRKV KSPVIAGFLL GKINRARDLG ITLSISEESL
LPDTDDVDAT NELITVLGNL IENAMDAIDG QENCEISVSF HHQNGRLHCT VGDDGPGISP
ESQARIYEQG FSTKGSGRGI GLFLTKQSLE KIGGTIEFES EPEVYTQFFV TIPYQARLFD
HD
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