Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0034 |
Symbol | |
ID | 8130934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 38051 |
End bp | 38464 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644863305 |
Product | heat shock protein IbpA |
Protein accession | YP_003015633 |
Protein GI | 253686443 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTAACC CCGATTTTTC CCCACTGTAC CGTTCCGCTA TTGGTTTCGA TCGTCTGTTC AATCTGTTAG AAACCGGCCA GACCCAGAGC AACGGCGGCT ATCCTCCCTA CAACGTCGAG CTGGTTGACG AGAACCAATA CCGCATCGCG ATTGCCGTAG CCGGCTTCGC CGAGCAGGAA CTGGACATCA CAGCACATGA CAACCTATTG ATTGTAAAAG GCGCCCACGC TGGTGAGCAG GTTGCCCGCA ACTACCTGTA TCAGGGTATT GCCGAGCGTA ACTTCGAGCG TAAATTCCAG CTGGCCGAAC ATATTCAGGT AAAAGGCGCC AATCTGGAAA ACGGGCTGCT GTACATCGAT CTTGAGCGCA TCGTGCCGGA AGCGATGAAG CCGCGCCGGA TTGAAATCAA GTAA
|
Protein sequence | MRNPDFSPLY RSAIGFDRLF NLLETGQTQS NGGYPPYNVE LVDENQYRIA IAVAGFAEQE LDITAHDNLL IVKGAHAGEQ VARNYLYQGI AERNFERKFQ LAEHIQVKGA NLENGLLYID LERIVPEAMK PRRIEIK
|
| |