Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0024 |
Symbol | |
ID | 8130924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 26960 |
End bp | 27754 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644863295 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003015623 |
Protein GI | 253686433 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGAA CGCCCTCTTC CCTGGCACAG CGGTTGGCAC CTTTCCTGCT CCCCGTGACG CTGTTGGTCG CGTGGCAGGT CGCCGTCGAG TTCGGCTGGC TATCCAACCG GATTCTGCCT GCGCCCAGCT CGGTGATCAC CGCAGGCTGG TCGCTCATCT ACAGCGGCGA ACTGTGGCAG CATCTGGCGA TTAGCGGCTG GCGCGCCCTG ATTGGGTTTG CTATCGGCGG CACTATCGGA TTGACGCTCG GCTTTATCAC CGGGCTGTCG CGCTGGGGCG AACGCCTGCT GGACAGCTCG GTGCAGATGA TCCGCAACGT TCCACATCTG GCGCTGATTC CGCTGGTGAT TCTGTGGTTT GGGATTGATG AGGCGGCCAA GATCTTTCTG GTAGCGCTGG GTACGCTGTT CCCGGTTTAT CTCAACACTT ATCACGGCAT TAAAAACATC GATCGCGGCC TGCTGGAAAT GGCACGCAGC TACGGGCTGT CCGGTCTGAG CCTGTTTTAT CAGGTGGTGC TGCCCGGCGC ACTGCCGTCC ATCATGGTCG GTATCCGCTT CGCACTGGGC TTTATGTGGC TGACGCTCAT CGTCGCGGAA ACCATTTCTG CCAACTCCGG CATCGGCTAT CTCGCCATGA ACGCCCGTGA GTTTTTGCAA ACGGACGTGG TGGTGGTCGC CATCATCCTT TACGCCCTGC TCGGCAAGCT GGCCGATATC AGCGCTCAAG GGCTGGAGCG CATATGGCTG CGCTGGAATC CGGCTTATCA AACCTCATCG GGGGACGCAT CATGA
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Protein sequence | MARTPSSLAQ RLAPFLLPVT LLVAWQVAVE FGWLSNRILP APSSVITAGW SLIYSGELWQ HLAISGWRAL IGFAIGGTIG LTLGFITGLS RWGERLLDSS VQMIRNVPHL ALIPLVILWF GIDEAAKIFL VALGTLFPVY LNTYHGIKNI DRGLLEMARS YGLSGLSLFY QVVLPGALPS IMVGIRFALG FMWLTLIVAE TISANSGIGY LAMNAREFLQ TDVVVVAIIL YALLGKLADI SAQGLERIWL RWNPAYQTSS GDAS
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