Gene PC1_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0024 
Symbol 
ID8130924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp26960 
End bp27754 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content60% 
IMG OID644863295 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003015623 
Protein GI253686433 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAA CGCCCTCTTC CCTGGCACAG CGGTTGGCAC CTTTCCTGCT CCCCGTGACG 
CTGTTGGTCG CGTGGCAGGT CGCCGTCGAG TTCGGCTGGC TATCCAACCG GATTCTGCCT
GCGCCCAGCT CGGTGATCAC CGCAGGCTGG TCGCTCATCT ACAGCGGCGA ACTGTGGCAG
CATCTGGCGA TTAGCGGCTG GCGCGCCCTG ATTGGGTTTG CTATCGGCGG CACTATCGGA
TTGACGCTCG GCTTTATCAC CGGGCTGTCG CGCTGGGGCG AACGCCTGCT GGACAGCTCG
GTGCAGATGA TCCGCAACGT TCCACATCTG GCGCTGATTC CGCTGGTGAT TCTGTGGTTT
GGGATTGATG AGGCGGCCAA GATCTTTCTG GTAGCGCTGG GTACGCTGTT CCCGGTTTAT
CTCAACACTT ATCACGGCAT TAAAAACATC GATCGCGGCC TGCTGGAAAT GGCACGCAGC
TACGGGCTGT CCGGTCTGAG CCTGTTTTAT CAGGTGGTGC TGCCCGGCGC ACTGCCGTCC
ATCATGGTCG GTATCCGCTT CGCACTGGGC TTTATGTGGC TGACGCTCAT CGTCGCGGAA
ACCATTTCTG CCAACTCCGG CATCGGCTAT CTCGCCATGA ACGCCCGTGA GTTTTTGCAA
ACGGACGTGG TGGTGGTCGC CATCATCCTT TACGCCCTGC TCGGCAAGCT GGCCGATATC
AGCGCTCAAG GGCTGGAGCG CATATGGCTG CGCTGGAATC CGGCTTATCA AACCTCATCG
GGGGACGCAT CATGA
 
Protein sequence
MARTPSSLAQ RLAPFLLPVT LLVAWQVAVE FGWLSNRILP APSSVITAGW SLIYSGELWQ 
HLAISGWRAL IGFAIGGTIG LTLGFITGLS RWGERLLDSS VQMIRNVPHL ALIPLVILWF
GIDEAAKIFL VALGTLFPVY LNTYHGIKNI DRGLLEMARS YGLSGLSLFY QVVLPGALPS
IMVGIRFALG FMWLTLIVAE TISANSGIGY LAMNAREFLQ TDVVVVAIIL YALLGKLADI
SAQGLERIWL RWNPAYQTSS GDAS