| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0015 |
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| Symbol | |
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| ID | 8130915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 17358 |
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| End bp | 18908 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644863286 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003015614 |
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| Protein GI | 253686424 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAT CGACTCTGGC GTTATTGTTT ACCGTTTTAT TTTCATCTTC ACCTTTGGTT
TATAGCGCGG ACCTGAATAT CGGTTTGGCT TCCTCCACCA CATCAATGGA TCCGCAGTTT
TATGTGAGTG GAGCGAATAG CGCAATGGCG CGCAATATTT TTGACGGTTT GGTTGTACAG
GATGAAAAAC AGCAGATTGC ACCTGCCCTG GCAACCAGTT GGAAAGTGAT TGACGACAAG
ACGTGGGAAT TTGTATTGCG TCCTGGCGTT AAGTTTCACG ACGGCAGTGA TTTTACGGCT
AAAGATGTGA TTGCCAGCAT TAAGCGTGTT GCGCTGGCAT CAAAAAACAG CCCTAGCTCT
TACGCACCTT ACGTCAGCGA CATTGCTGAA GTAATAGAAG TTAATCCACT AACGGTGCGG
ATTAAGACAA AAGAGGCTTC GCCACTGCTG CTGAATAATT TAAGTCGGAT TTCGATTTTA
CCGGCCCGAC TTGAGAACGT CCCGACGGAA ACGTTGAATT CAGGAAAAGA TGTGATTGGT
ACAGGGCCAT TCAAATTTGT TTCCTGGGTG CCGGACGACC GGGTAGTCCT TAGTCGTAAT
GACGATTACT GGGGAGGAAA AGCAGAGTGG GACAACGTTA CTGTCCGTGT ATTTAAAAAC
AGTAGTGCAC GTGTAGCAGC AGTATTATCC GGTGATGTGG ACATGATCGA AAACGTTCCA
ACAGCCGACA GCAGTAATAT TGAAAAAAAT CAGCAGTTAA AAACGATTTC AACACCAGGG
AATCGTGTTA TTTACCTTCA CATGGACCAG CAGCGAGAGG AATCACCGTT CGCCAAAGGT
CCTGATGGTA AAAACCCATT ACTAAAAAAA GAAGTACGCC AGGCGATGTC TTTAGCTATT
AATCGTCAGG CAATCGTCGA CCGTGTGATG GAGGGGCAGG CTGTTGTTGC CTCTCAGCTT
GTACCGAAGG GGTACCCAGG CTATTCCGCT TCCATTCCTG CGCCGGTTTA TAATCCGGAG
AAAGCCAAAC AGGAACTGGC GGCGGCGGGT TACCCCGACG GCTTCACGCT GACCTTCCAC
GCGTCGAACG ATCGTTATCC TAATGATTCT AAAATTGCTC AGGCCATTGG CCAAATGTTC
ACACGCGCCG GCATCAAAAC CGAAGTCGTT ACGATGCCCG GCAGTGTGTA CTTCTCACGC
GCGTCTCGTC TCGAATTCAG TTTGATTATG GGCGGGGCCG CGATTGAAAC CGGGGAAGCT
TCTGGCGTAT TGGGGCCATT GTTAGAAACC TTTGGCCCTA ATGCAGGACA GGGTAATCGT
GGTCGCTATT CCAACCCTGC CTTTGATAAA GCGCTAAGCG AAGCGCGTGT CACATTGGAT
GAAACTAAAC GTGATGCGCT GCTGGCTGAA GCGATGAACA TTGGCATGAA CGATCTGGGT
GTCATTCCGG TGATGTTCCT GTCCAACACC TGGGCGATGA AAAAGCAGTA TACCTATGTG
GGTCGTTCCG ATGCCTACAC GCTGCCGTAC TTCGTCCGTT CCGCAAAATA G
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| Protein sequence | MKKSTLALLF TVLFSSSPLV YSADLNIGLA SSTTSMDPQF YVSGANSAMA RNIFDGLVVQ
DEKQQIAPAL ATSWKVIDDK TWEFVLRPGV KFHDGSDFTA KDVIASIKRV ALASKNSPSS
YAPYVSDIAE VIEVNPLTVR IKTKEASPLL LNNLSRISIL PARLENVPTE TLNSGKDVIG
TGPFKFVSWV PDDRVVLSRN DDYWGGKAEW DNVTVRVFKN SSARVAAVLS GDVDMIENVP
TADSSNIEKN QQLKTISTPG NRVIYLHMDQ QREESPFAKG PDGKNPLLKK EVRQAMSLAI
NRQAIVDRVM EGQAVVASQL VPKGYPGYSA SIPAPVYNPE KAKQELAAAG YPDGFTLTFH
ASNDRYPNDS KIAQAIGQMF TRAGIKTEVV TMPGSVYFSR ASRLEFSLIM GGAAIETGEA
SGVLGPLLET FGPNAGQGNR GRYSNPAFDK ALSEARVTLD ETKRDALLAE AMNIGMNDLG
VIPVMFLSNT WAMKKQYTYV GRSDAYTLPY FVRSAK
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