Gene PC1_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0011 
Symbol 
ID8130911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp13401 
End bp13727 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content52% 
IMG OID644863282 
Productphosphotransferase system PTS lactose/cellobiose-specific IIA subunit 
Protein accessionYP_003015610 
Protein GI253686420 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1447] Phosphotransferase system cellobiose-specific component IIA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGATG AAACCACGAT AATGGAATTG ATTATTTATG CGGGAGAGGC GCGCTCCAGC 
TCAATGGAGG CGCTGAGCGC CGCCAGAAAA TATGACTGGG ACAAGGCTGA AGAACTGCTG
AACGCGGCTT CTGTGGCGGC GCGCAAAGCC CATCAAATCC AGACAGCTTT GATTGGTGCC
GATGAGGGCA GCGGAAAAAT CCCGGTCAAT CTGATTCTGG TTCACGCGCA AGATCACCTG
ATGAACGCGA TGCTATGCCG TGAACTGGTG GAGGAGCTGA TTCAACTGCA TCGGGAAATC
TCCTCCCTGA AACAGCTTAT AAATTAA
 
Protein sequence
MLDETTIMEL IIYAGEARSS SMEALSAARK YDWDKAEELL NAASVAARKA HQIQTALIGA 
DEGSGKIPVN LILVHAQDHL MNAMLCRELV EELIQLHREI SSLKQLIN