Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0011 |
Symbol | |
ID | 8130911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 13401 |
End bp | 13727 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644863282 |
Product | phosphotransferase system PTS lactose/cellobiose-specific IIA subunit |
Protein accession | YP_003015610 |
Protein GI | 253686420 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1447] Phosphotransferase system cellobiose-specific component IIA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGATG AAACCACGAT AATGGAATTG ATTATTTATG CGGGAGAGGC GCGCTCCAGC TCAATGGAGG CGCTGAGCGC CGCCAGAAAA TATGACTGGG ACAAGGCTGA AGAACTGCTG AACGCGGCTT CTGTGGCGGC GCGCAAAGCC CATCAAATCC AGACAGCTTT GATTGGTGCC GATGAGGGCA GCGGAAAAAT CCCGGTCAAT CTGATTCTGG TTCACGCGCA AGATCACCTG ATGAACGCGA TGCTATGCCG TGAACTGGTG GAGGAGCTGA TTCAACTGCA TCGGGAAATC TCCTCCCTGA AACAGCTTAT AAATTAA
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Protein sequence | MLDETTIMEL IIYAGEARSS SMEALSAARK YDWDKAEELL NAASVAARKA HQIQTALIGA DEGSGKIPVN LILVHAQDHL MNAMLCRELV EELIQLHREI SSLKQLIN
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