| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0007 |
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| Symbol | |
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| ID | 8130907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 8261 |
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| End bp | 10171 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644863278 |
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| Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
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| Protein accession | YP_003015606 |
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| Protein GI | 253686416 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCTGG CGGGCGTTAG CACTATCGCA CTCGGTTTTA TTCTCACTAT CGGCCTGTTG
ATCTGGCAAT CCGGCCAGCA ACAAAAGACC ATCGCACAGC ATTATCTTGA GCAAACAGCG
TATACCAACA GCTACCTTAT TCAGCAAAAG CTGGATGTCG CGCTACATGC GGCGCGCAAT
CTGGTGCAGA GCGTTGTCAG TCTGCAAGAA GCAGGCAATG CCGATCGGAA AACCGCAGAA
ACGCTGCTGA AGAATGCGCT GAAGAGCCAC CCCGATTTCC TTTCGATGTC GCTGGCATGG
GAACCTGATG CGTTCGACGG CAAAGATCGG GAGTACGCTG GTCAGCCCGA TCAGGACCCG
CAAGGTCGCT TCGTCCGTTA TGTCGACCGA GATACCGCAG GCAACGTTGC TCTGCATAAT
CTGGTGGATT ATGAAACACC CGGCAGCGGC GATTACTACC TGCTACCGAA GAAACTCCAG
AAAGAAGTGA TTCTGGAACC GTATAGCTAC CCTTACAACG GTGTCGATGT CCTGCTGACC
TCCATTGCCG TGCCGATCAT TATCAACAAT AAGTTTTACG GCTCCGTCAC CGCGGATTTT
TCGCTGGATA CGCTGCAACA GCTCACCAAT AACATCAAAC CCTATGAGGG TACGGGCTAC
GCCCAGCTGC TGTCGCACTC CGGCGCCTAC ATCTCTCACC CCGAAAAAGC CCGGGTGACC
AAAAAAATTG AAAACGACCC GACGCTGCTT GAGCATGTCA CCACAGGGCA GCCTTATCAG
ATTGAACGTG ATAATGCCGT GCTGAACACG CCAGCGTTTA ACGTGTATGT GCCAGTCACC
ATCGGCAATA CCGGTACACC CTGGATGCTC GGCCTGTCCG CCCCCGTTAA TGTGGTGATG
GCGGAAACGG TGCGGCAGCG CAACATAGGG CTACTGCTTA TGGTACTGAG TATCGTGGTG
GTTTCTGGCG TACTGGGCAT CATCTTTAAC CGCAAAGTCG CTCGGCCTAT CGGTGGGGAA
CCGGCTCAGG CTGCACAGAT CGCGCTGTCC GTCGCGCAGG GGGATTTAAC GCAGACCATT
CCTGTGCAGC CAAAAGACGA TAGCAGTATT TTTTACGCTA TGAACGCTAT GCAGTCACAG
CTGCGAGACA TCGCCGAACA GTTGATTAGC ACCAGCGAAT CCGTCAGCCA CGGCGCAACA
GAAATTGCGG CAGGCAACAC CGATCTGGCC TCCCGTACCG AGCAACAGGC GGCGGCGCTG
GAAGAAACCG CCGCCAGCAT GGAACAGATT ACGGCGACGG TGAAACAAAA TGCGGATAAC
GCCCATAACG CCACAACGCT GGCGCAGAAC GCGGCCCACA TCGCTCAGAA AGGTGACAAG
ATTGTCGGTC AGGTTGTTCA CATCATGAGT GAGATCGACG ACAGTTCGAA GAAGATTGCC
GACATTACCA GCATCATTAA CGGCATCGCG TTCCAGACCA ATATTCTGGC ACTCAACGCG
GCGGTAGAAG CCGCCAGAGC GGGCGAACAA GGGCGCGGTT TTGCAGTGGT TGCCAACGAG
GTTCGCAACC TCGCGCAGCG TAGCGCCAGT GCCGTAAAAG ATATCACCGC GCTGATAACA
GAATCCGCCA ACCGCGTCGA CAGCGGCGTC ACGCTGGTTC AGAGCGCTGG CGAGACCATG
CAGGACATGC TGCGTGCTGT CACGTCGGTT AAAGACATCA TGGATGAGAT CGTCTCAGCA
TCGGATGAAC AATCGCGCGG GATCAGTCAG GTGACGCAGG CCGTTCACGA GATGGACGGC
GTCACCCAGC AGAACGCCGC GCTGGTGCAG GAAGCCACAG CGGCTGCCGC CTCGCTGGAA
GAACAGGCCA GACAGCTCGC GCAAACGGTG CTGGTATTCA AGCTCTCGTA A
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| Protein sequence | MLLAGVSTIA LGFILTIGLL IWQSGQQQKT IAQHYLEQTA YTNSYLIQQK LDVALHAARN
LVQSVVSLQE AGNADRKTAE TLLKNALKSH PDFLSMSLAW EPDAFDGKDR EYAGQPDQDP
QGRFVRYVDR DTAGNVALHN LVDYETPGSG DYYLLPKKLQ KEVILEPYSY PYNGVDVLLT
SIAVPIIINN KFYGSVTADF SLDTLQQLTN NIKPYEGTGY AQLLSHSGAY ISHPEKARVT
KKIENDPTLL EHVTTGQPYQ IERDNAVLNT PAFNVYVPVT IGNTGTPWML GLSAPVNVVM
AETVRQRNIG LLLMVLSIVV VSGVLGIIFN RKVARPIGGE PAQAAQIALS VAQGDLTQTI
PVQPKDDSSI FYAMNAMQSQ LRDIAEQLIS TSESVSHGAT EIAAGNTDLA SRTEQQAAAL
EETAASMEQI TATVKQNADN AHNATTLAQN AAHIAQKGDK IVGQVVHIMS EIDDSSKKIA
DITSIINGIA FQTNILALNA AVEAARAGEQ GRGFAVVANE VRNLAQRSAS AVKDITALIT
ESANRVDSGV TLVQSAGETM QDMLRAVTSV KDIMDEIVSA SDEQSRGISQ VTQAVHEMDG
VTQQNAALVQ EATAAAASLE EQARQLAQTV LVFKLS
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