| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0004 |
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| Symbol | gyrB |
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| ID | 8130904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3728 |
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| End bp | 6145 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644863275 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_003015603 |
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| Protein GI | 253686413 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.777143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAATT CTTATGACTC CTCAAGTATC AAGGTATTGA AAGGGCTGGA TGCGGTACGT
AAACGCCCAG GTATGTATAT CGGCGATACG GATGACGGTA CCGGCCTGCA TCACATGGTA
TTCGAGGTTG TGGACAACGC TATCGACGAA GCGCTCGCTG GCTATTGTAA AGACATTATC
ATCACCATCC ATGCCGATAA CTCGGTGTCG GTGCAGGATG ATGGCCGTGG TATTCCGACC
GGCATTCATG AAGAAGAAGG GATCTCCGCT GCTGAAGTCA TCATGACCGT GCTGCATGCG
GGCGGTAAGT TTGATGATAA CTCGTATAAA GTCTCCGGCG GCCTGCACGG CGTAGGGGTT
TCCGTGGTTA ACGCCCTGTC GGAAAAACTG AAACTGGTTA TTCACCGCGA CGGAAAACTT
CACGAGCAGA CCTACAAACA CGGCGTGCCG CAGGCACCGC TGGCGGTGAC GGGTGAAACC
AATAGAACCG GTACCACGGT GCGCTTCTGG CCGAGCCATG AAACGTTCAC CAATGTGGTG
GAATTCGAAT ATGAAATTTT GGCCAAGCGC CTGCGTGAGC TGTCGTTTCT GAACTCCGGC
GTTTCTATTC GCCTGATCGA CGAGCGCGAG AAAGATAAAG CCGATCATTA CCATTATGAT
GGCGGTATCA AGGCATTCGT TGATTACCTG AACCGTAACA AGACCCCTAT TCACCCGAAC
GTGTTCTATT TCTCGACGGT GAAAGATGAC ATCGGCGTGG AAGTGGCGTT GCAGTGGAAC
GATGGTTTCC AGGAAAACAT TTACTGCTTC ACCAACAACA TTCCACAGCG TGACGGTGGT
ACGCACCTGG CCGGTTTCCG TGCCGCGATG ACCCGTACGT TGAATACCTA CATGGATAAA
GAAGGCTACA GCAAGAAAGC CAAAGTCAGC GCCACCGGTG ACGATGCGCG TGAAGGGTTG
ATTGCCGTCG TTTCCGTGAA AGTGCCGGAT CCGAAATTCT CCTCGCAGAC CAAAGACAAG
CTGGTTTCTT CCGAAGTGAA AACCGCCGTC GAATCGCTGA TGAACGAGAA GCTGGTGGAT
TATCTGATGG AAAACCCGTC AGACGCCAAA ATCGTGGTCG GTAAAATTAT TGATGCCGCA
CGTGCCCGTG AAGCGGCGCG TAAAGCGCGT GATATGACAC GCCGTAAAGG CGCGCTCGAT
CTGGCTGGTC TGCCGGGCAA ACTGGCGGAC TGTCAGGAAC GCGATCCGGC GCTGTCCGAA
CTGTACCTGG TGGAAGGGGA CTCCGCGGGC GGCTCTGCCA AGCAGGGGCG TAACCGTAAG
AACCAGGCGA TTCTGCCGCT GAAGGGTAAA ATCCTGAACG TTGAGAAAGC CCGTTTTGAC
AAGATGCTTT CCTCGCAGGA AGTCGCGACG CTGATCACCG CGCTGGGCTG CGGCATTGGC
CGCGATGAAT ACAACCCGGA TAAACTGCGC TACCACAACA TCATCATCAT GACCGATGCT
GACGTCGATG GTTCGCACAT CCGTACCCTG TTGTTGACCT TCTTCTATCG CCAACTACCT
GAAATTGTTG AGCGTGGCCA TGTTTATATT GCGCAGCCGC CGCTGTACAA GGTGAAAAAG
GGTAAGCAGG AACAGTACAT CAAAGATGAT GAAGCGATGG ATCAGTACCA GATCATGCTG
GCACTGGACG GCGCGACGCT GCACACCAAT GCGCAGGCAC CAGCGTTGGC GGGAGAACCG
CTGGAGAAGC TGGTTTCTGA ACACTATGCC GTACAGAAGC TGATTGGCCG TATGGAACGT
CGCTTCCCGC GCGCATTGTT GAACCGTCTG ATCTATCAAC CGACGCTGTC CGAAGCCGAT
TTGAACGAAC GTGAAAACGT GCAGGCGTGG GCGGAGTCAC TGGTTAACAG CCTGAACGAA
AGCGAATTGC ACGGCAGTAC ATACAGCTTT GTCATTCATC ATGATGAAGA ACGTGGCGTA
TTTGAACCAG CGCTGCGCGT GCGTACGCAC GGTGTGGATA CCGATTATCC GCTGGGTGCG
GGCTTCGTAG CGGGTAGCGA ATATCGCAAG CTGAATCAGC TGGGCGAAAA ACTGCGTGGC
TTGATTGAAG AAGATGCGTA CATCGAACGT GGCGAGCGTC GTCAACCGGT TGCCAGCTTT
GAGCAGGCGC TGGAGTGGCT GGTGAAAGAA TCCCGCCGTG GTCTGACCGT ACAGCGTTAT
AAAGGTCTGG GTGAAATGAA CCCGGATCAG CTGTGGGAAA CCACGATGGA TCCAAACAGC
CGCCGCATGC TGCGCGTGAC GGTAAAAGAC GCGATTGCCG CTGATGAGCT GTTCACGACC
CTGATGGGTG ATGCCGTTGA ACCGCGCCGT GCGTTTATCG AAGAAAACGC CCTGAAGGCG
ATGAATATCG ATATTTGA
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| Protein sequence | MSNSYDSSSI KVLKGLDAVR KRPGMYIGDT DDGTGLHHMV FEVVDNAIDE ALAGYCKDII
ITIHADNSVS VQDDGRGIPT GIHEEEGISA AEVIMTVLHA GGKFDDNSYK VSGGLHGVGV
SVVNALSEKL KLVIHRDGKL HEQTYKHGVP QAPLAVTGET NRTGTTVRFW PSHETFTNVV
EFEYEILAKR LRELSFLNSG VSIRLIDERE KDKADHYHYD GGIKAFVDYL NRNKTPIHPN
VFYFSTVKDD IGVEVALQWN DGFQENIYCF TNNIPQRDGG THLAGFRAAM TRTLNTYMDK
EGYSKKAKVS ATGDDAREGL IAVVSVKVPD PKFSSQTKDK LVSSEVKTAV ESLMNEKLVD
YLMENPSDAK IVVGKIIDAA RAREAARKAR DMTRRKGALD LAGLPGKLAD CQERDPALSE
LYLVEGDSAG GSAKQGRNRK NQAILPLKGK ILNVEKARFD KMLSSQEVAT LITALGCGIG
RDEYNPDKLR YHNIIIMTDA DVDGSHIRTL LLTFFYRQLP EIVERGHVYI AQPPLYKVKK
GKQEQYIKDD EAMDQYQIML ALDGATLHTN AQAPALAGEP LEKLVSEHYA VQKLIGRMER
RFPRALLNRL IYQPTLSEAD LNERENVQAW AESLVNSLNE SELHGSTYSF VIHHDEERGV
FEPALRVRTH GVDTDYPLGA GFVAGSEYRK LNQLGEKLRG LIEEDAYIER GERRQPVASF
EQALEWLVKE SRRGLTVQRY KGLGEMNPDQ LWETTMDPNS RRMLRVTVKD AIAADELFTT
LMGDAVEPRR AFIEENALKA MNIDI
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