Gene Dd1591_4184 details

Gene Information

• Locus tag: Dd1591_4184
• ID: 8117634
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 4727454
• End bp: 4729343
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 644854564
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_003006459
• Protein GI: 251791738
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.225264
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTATC CGGATCCTTT TGACGTCATC GTGATCGGTG GCGGTCATGC GGGTACAGAA 
GCCGCCATGG CTTCGGCCCG AATGGGACGT CAAACCCTTT TGCTGACGCA TAACATTGAT 
ACGCTGGGAC AAATGTCCTG CAACCCGGCG ATCGGCGGTA TTGGGAAAGG TCATCTGGTA 
AAAGAGATCG ATGCCATGGG CGGGTTGATG GCTCGCGCTA TCGATCGCGG CGGCATTCAG 
TTTAGGATAC TAAACTCCAG TAAAGGCCCG GCGGTGCGCG CTACTCGTGC TCAGGCCGAC 
AGAGTGTTGT ACCGTCAGGC GGTGCGTACG GCACTGGAGA ATCAACCGAA TCTGACGCTC 
TTCCAACAAG CCGTAGAAGA TCTGATTGTC GAAAATGATC GCGTCGTCGG CGCGGTCACT 
CAAATGGGGC TGAAATTCCG TGCTAAAGCG GTGGTGCTCA CGGTCGGTAC TTTCCTGGAC 
GGCAAGATCC ATATCGGTCT GGATAATTAC AGCGGCGGAC GAGCGGGCGA TCCGCCGTCG 
ATCGCGTTGT CGCATCGTTT GCGTGAACTG CCGCTGCGTG TTGGCCGTCT GAAAACCGGT 
ACGCCGCCGC GTATCGATGC CCGCACTATC GACTTTAGCG TATTGACGCC GCAGCACGGT 
GACGATCCCA TGCCGGTATT TTCCTTCCTG GGGAAAGCCA GCGAACATCC AACCCAAATG 
CCGTGCTACA TCACTCATAC CAATGAACGT ACGCATGATG TGATCCGTAG CAATCTGGAT 
CGCAGTCCAA TGTATGCCGG CGTGATCGAA GGGATCGGCC CGCGCTACTG CCCTTCCATT 
GAAGACAAAG TGATGCGATT TGCCGATCGC AACGCGCACC AGATTTTCCT GGAGCCGGAA 
GGGCTGACCA GTAACGAGAT TTACCCGAAC GGCATCTCAA CCAGCCTGCC GTTCGATGTA 
CAGTGGCAAA TCGTTCGTTC TATGGACGGT ATGCAGAATG CGCGTATCGT TCGCCCTGGT 
TACGCCATTG AGTATGACTA TTTTGACCCG CGAGACCTGA AACCGACGTT GGAAAGTAAG 
TTTATCCACA ATCTATTTTT TGCTGGTCAG ATCAACGGCA CGACCGGTTA CGAAGAAGCG 
GCGGCACAAG GGATGCTGGC GGGCCTGAAT GCCGCTCGTC TGGCGTTTGA TCAGGAAGGC 
TGGACGCCAC GCCGTGATCA AGCCTACATC GGCGTGCTGG TGGATGATCT TTGTACGCTG 
GGAACGAAAG AGCCCTACCG TATGTTTACC TCTCGCGCCG AATACCGGTT GATGCTGCGT 
GAGGACAATG CCGACTTGCG CTTGACTGCC ATTGGCCGCG AGCTGGGAAT GGTAGACGAC 
GAACGCTGGG CTCGTTTTAA CGAGAAGCTG GAAAATATCG AGAAAGAACG CCAACGTCTG 
CGCGATGTGC TGGTTCATCC ACACTCTGAA GGCGTAGAAC AGATCAACAG CCTGTTGAAA 
TCGCCGTTGT CGCGCGAGGC CAACGGGGAG GACTTGCTAA GACGCCCGGA AATGGACTAC 
GTGCAGCTGA CTGGATTGCC GATGTTTGCA CCGGCGTTGC CTGATGTTCA GGCCGCAGAG 
CAGGTAGAGA TTCAGGTTAA ATACGAAGGC TACATCGCTC GTCAGCAGGA TGAGATCGAA 
AAGCAACAGC GCAACGAGAA CACGTTGCTG CCGGCGGATC TGGATTATCG TCAGGTTAGC 
GGTCTATCGA ATGAGGTTAT CGCCAAACTC AACGATCACA AACCGAGCTC GATTGGTCAG 
GCATCGCGCA TTTCCGGCAT TACGCCGGCG GCCATTTCAA TTCTGCTGGT TTGGCTGAAA 
AAACAAGGTA TGCTGCGCCG CAGCGCTTAA 

 

Protein sequence

MFYPDPFDVI VIGGGHAGTE AAMASARMGR QTLLLTHNID TLGQMSCNPA IGGIGKGHLV 
KEIDAMGGLM ARAIDRGGIQ FRILNSSKGP AVRATRAQAD RVLYRQAVRT ALENQPNLTL 
FQQAVEDLIV ENDRVVGAVT QMGLKFRAKA VVLTVGTFLD GKIHIGLDNY SGGRAGDPPS 
IALSHRLREL PLRVGRLKTG TPPRIDARTI DFSVLTPQHG DDPMPVFSFL GKASEHPTQM 
PCYITHTNER THDVIRSNLD RSPMYAGVIE GIGPRYCPSI EDKVMRFADR NAHQIFLEPE 
GLTSNEIYPN GISTSLPFDV QWQIVRSMDG MQNARIVRPG YAIEYDYFDP RDLKPTLESK 
FIHNLFFAGQ INGTTGYEEA AAQGMLAGLN AARLAFDQEG WTPRRDQAYI GVLVDDLCTL 
GTKEPYRMFT SRAEYRLMLR EDNADLRLTA IGRELGMVDD ERWARFNEKL ENIEKERQRL 
RDVLVHPHSE GVEQINSLLK SPLSREANGE DLLRRPEMDY VQLTGLPMFA PALPDVQAAE 
QVEIQVKYEG YIARQQDEIE KQQRNENTLL PADLDYRQVS GLSNEVIAKL NDHKPSSIGQ 
ASRISGITPA AISILLVWLK KQGMLRRSA