Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_4171 |
Symbol | |
ID | 8117621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 4712498 |
End bp | 4713430 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644854551 |
Product | ribokinase |
Protein accession | YP_003006446 |
Protein GI | 251791725 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000241058 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAATGA AATCAGGCAA GCTGGTAGTC TTGGGAAGTA TCAACGCGGA TCATATTTTG AATCTGGCGC AGTTTCCCCG TCCGGGCGAA ACGGTGATCG GTAAACAGTA TGGCGTGGCA TTCGGCGGCA AAGGCGCCAA CCAGGCGGTA GCTGCCGGAC GTAGCGGCGC TGATATCGAG TTTATCGCTT GTGTCGGGGC GGACGATATC GGCGAGCGTA TTCGCCAGCA ACTGATTAAA GACCGTATTG ATGTCTCCGC TGTCGAGGCG ATTCCAGGGC AGACTACCGG AGTAGCGCTG ATTTTCGTTA ACGGTGAAGC TGAAAATATG ATCGCTATTC ATGCGGGAGC CAACGCAGCC GTCACGCCTG ATTACCTGAA TCGCTATCAA CAGAAAATTG TAGCGGCATC CGCATTGTTG ATGCAGTTGG AGTCGCCGCT GGAAACAGTG GCTGCGGCCG CTCGTCTGGC TCATGACAGC GGAACGAAAG TGATCCTGAA TCCGGCGCCG GCTTGCCCGT TACCTGATGA ATTGTTGTCG CTGGTGGATA TGATCACCCC GAATGAAACA GAAGCGCAGA TTCTGACCGG CGTTACCGTC GAAACCGAAG AGGATGCGCA ACGTGCCGCA CAGGTGCTGC ATGATAAAGG CATTTCGACG GTACTGATTA CTCTGGGTAG CCGCGGTGTT TGGTTAAGCG AGCAGGGTAA TGGGCGGCGC ATTGCCGGTT TCCGTGTCAA AGCGGTTGAT ACCATTGCCG CCGGCGATAC ATTCAACGGC GCACTGGTGA CGGCTCTTTT AGAGTCTCGC CCAATGGATG CCGCAGTTAA ATTCGCTCAT GCAGCGGCGG CTATCGCAGT AACTCGCCAT GGCGCTCAGC CTTCCGTTCC CTGGCGTGAA GAGATTGATG CCTTCCTGAA TGCACAGGAG TAA
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Protein sequence | MVMKSGKLVV LGSINADHIL NLAQFPRPGE TVIGKQYGVA FGGKGANQAV AAGRSGADIE FIACVGADDI GERIRQQLIK DRIDVSAVEA IPGQTTGVAL IFVNGEAENM IAIHAGANAA VTPDYLNRYQ QKIVAASALL MQLESPLETV AAAARLAHDS GTKVILNPAP ACPLPDELLS LVDMITPNET EAQILTGVTV ETEEDAQRAA QVLHDKGIST VLITLGSRGV WLSEQGNGRR IAGFRVKAVD TIAAGDTFNG ALVTALLESR PMDAAVKFAH AAAAIAVTRH GAQPSVPWRE EIDAFLNAQE
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