Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_4161 |
Symbol | |
ID | 8117607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 4695814 |
End bp | 4697187 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644854537 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_003006436 |
Protein GI | 251791715 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0332782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGAAC AGGCTATTGA CTGGGATTTA GCCCTGATCC AGAAATACAA CTATTCGGGG CCTCGCTATA CGTCCTATCC TACCGCACTG GAATTCAGCG ACAGTTATGA TGACGCAGCG TTTGCCCAGG CGGTGGCCCG TTATCCTCAC CGCCCGCTGT CGCTGTATTT GCATATCCCG TTTTGCCACC GCCTGTGTTA TTTCTGCGGC TGTAATAAGC TGGTGACCCG GCAATTACAT AAAGCGGATG AATACCTTGA TCGGCTGGCG TTGGAAATAC ATCAACGCGC ACCGTTGTTT GCCAACCGCA CTGTTACGCA AATGCACTGG GGCGGCGGAA CGCCAACCTT CCTGAATAAA GCGCAGATTA GCCGCCTGAT GGCGTTGCTT CGCCGGCATT TCCATTTTTC TGAACACGCG GAAATGTCGC TGGAAGTGGA CCCGCGGGAA ATTGAATTGG ATGTGCTCGA TCATTTGCGC GCCGAAGGGT TCAATCGCCT TAGCATGGGG GTGCAGGACT TCAATAAAGA GGTGCAGCGG CTGGTTAATC GCGAGCAAGA TGAAGCCTTT ATTTTTGCGC TGATCGAGCG GGCCAAAGCG CTGGGGTTCG CCTCCACCAA CATTGATTTG ATCTACGGTT TGCCAAAGCA GACGCCTGAC AGCTTTGCCT TTACCTTGCA GCGGGTGGCG GAGCTGCGTC CGGATCGCCT GAGCGTATTC AATTATGCTC ATTTACCCAA CCTGTTTGCT GCGCAGCGCA AGATTAAAGA TGCTGATCTG CCGGATGCGG AACAAAAGCT GGCGATTTTG CAGCAAACCA TTCAAAGCCT GACCGCCGCG GGTTACCAGT TCATTGGTAT GGATCATTTT GCCCGGCCGG ACGACGAACT GGCGGTGGCG CAACGTGAAG GAAAACTGCA TCGCAATTTC CAGGGGTATA CCACCCAAGG CGACACCGAT TTACTGGGGT TGGGGGTTTC CGCCATCAGT ATGATTGGCG ACAGTTATGC CCAGAATCAG AAAGAATTGA AGCAGTACTA CGCTGACGTT GAACAGCGCG GTCACGCGTT ATGGCGCGGT TTATCCCTGA CTCGTGATGA TTGCATCCGT CGTGATGTGG TCAAGGCGTT AATTTGCCAT TTCCAACTGG AGTTTGCTGA GATTGAACAG GCATATGGCC TGTCGTTCGG TGACTATTTT CGCGAGGATT TGGCGCTGCT GGCGCCAATG GCACAAGATG GGTTGGTTGA TATTCTGGCC GAACGTATTC AGGTGACGCC GAAAGGGCGG CTGCTGATCC GCAATATTTG CATGTGCTTT GACATCTATT TGCGCAGCAA AATGCGTGAG CGTCAGTTTT CCCGGGTGAT TTAA
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Protein sequence | MSEQAIDWDL ALIQKYNYSG PRYTSYPTAL EFSDSYDDAA FAQAVARYPH RPLSLYLHIP FCHRLCYFCG CNKLVTRQLH KADEYLDRLA LEIHQRAPLF ANRTVTQMHW GGGTPTFLNK AQISRLMALL RRHFHFSEHA EMSLEVDPRE IELDVLDHLR AEGFNRLSMG VQDFNKEVQR LVNREQDEAF IFALIERAKA LGFASTNIDL IYGLPKQTPD SFAFTLQRVA ELRPDRLSVF NYAHLPNLFA AQRKIKDADL PDAEQKLAIL QQTIQSLTAA GYQFIGMDHF ARPDDELAVA QREGKLHRNF QGYTTQGDTD LLGLGVSAIS MIGDSYAQNQ KELKQYYADV EQRGHALWRG LSLTRDDCIR RDVVKALICH FQLEFAEIEQ AYGLSFGDYF REDLALLAPM AQDGLVDILA ERIQVTPKGR LLIRNICMCF DIYLRSKMRE RQFSRVI
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