Gene Dd1591_4155 details

Gene Information

• Locus tag: Dd1591_4155
• ID: 8117601
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: -
• Start bp: 4688934
• End bp: 4690757
• Gene Length: 1824 bp
• Protein Length: 607 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 644854531
• Product: GTP-binding protein TypA
• Protein accession: YP_003006430
• Protein GI: 251791709
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.785099
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCGAAA ATTTGCGTAA CATCGCTATT ATTGCGCACG TTGACCATGG AAAAACTACC 
CTGGTTGATA AGTTGCTGCA ACAGTCCGGT ACGTTGGGTG AACGTAATGA AGCCACCGAA 
CGTGTTATGG ACTCCAATGA TTTGGAAAAA GAGCGTGGAA TTACCATCCT CGCCAAAAAC 
ACCGCCATCA ACTGGAACGA CTACCGCATC AATATCGTGG ATACCCCGGG GCACGCCGAC 
TTCGGCGGCG AGGTAGAGCG CGTGATGTCC ATGGTGGACT CTGTACTGCT GCTGGTAGAC 
GCGATGGACG GCCCGATGCC GCAGACGCGT TTCGTGACTC AGAAAGCTTT TGCCTATGGC 
CTGAAGCCGA TTGTTGTCAT TAATAAAGTG GACCGCCCCG GCGCACGTCC TGACTGGGTG 
GTCGATCAGG TGTTTGACCT GTTTGTAAAC CTGGGCGCTA CCGACGAGCA GTTGGATTTC 
CCGATTGTTT ATGCGTCCGC GTTGAACGGT ATTGCCGGTC TGGACCATAA CGATATGGCG 
GAAGATATGA CTCCGCTGTT TGAAGCCATC GTGAAACACG TTGAAGCACC GAAGGTCGAC 
CTCAACGGCC CGTTCCAGAT GCAGATCTCT CAGTTGGATT ATAACAACTA CGTCGGCGTT 
ATCGGCATCG GCCGTATCAA GCGCGGTGTG GTGAAACCGA ACCAGCAGGT CAGCATCATC 
GATAGCGAAG GTAAGGTACG TAACGGCAAA GTGAGCCAGG TTCTGGGCCA TCTGGGTCTG 
CAACGTATTG AAAGCTCGCT GGCGGAAGCA GGCGACATCA TCGCCATCAC CGGCCTGGGC 
GAACTGAACA TTTCCGACAC TATCTGCGAT ACGTCCTGCG TGGAAGCGCT GCCGGCCTTG 
TCGGTGGACG AACCGACCGT GACCATGTAT TTCTGCGTTA ACACCTCGCC GTTCTGCGGT 
AAAGAAGGCA AATACGTCAC GTCACGTCAG ATTCTGGACC GTCTGCGTAA AGAGCTGGTG 
CACAACGTGG CGCTGCGTGT AGAAGAAACG GAAGATCCGG ACGCGTTCCG CGTATCTGGC 
CGTGGTGAAC TGCACCTGTC CGTTCTGATC GAGAACATGC GTCGTGAAGG TTTCGAACTG 
GCGGTGTCCC GCCCGAAAGT TATCTTCCGT ACCATCGACG GCCGCCGTCA GGAACCGTTC 
GAACAGGTAA CCGTGGATAT CGAAGAGCAG CATCAGGGCT CGGTGATGGA AGCGCTGGGT 
CTGCGCAAAG GCGAAATGCG CGACATGATC CCGGACGGCA AAGGTCGCGT ACGTCTGGAT 
TACGTGATCC CGAGCCGTGG TCTGATCGGC TTCCGTACCG AATTCATGAC CATGACCTCC 
GGTACTGGTC TGCTGTACTC CACTTTCAGT CACTACGATG ACATCCGTCC GGGTGAAATC 
GGCCAGCGTC AGAATGGCGT ACTGATCTCC AACGGTCAGG GTAAAGCGGT TGCTTATGCG 
CTGTTCAGCC TGCAGGATCG CGGTAAGCTG TTCTTGGGCC ACGGCGCTGA AGTGTACGAA 
GGCCAGGTCA TCGGTATTCA TACCCGTTCC AACGACCTGA CGGTTAACTG CCTGACTGGT 
AAGAAGCTGA CCAACATGCG TGCTTCCGGT ACCGACGAAG CTACCGTGCT GGTGCCGCCG 
GTGAAAATGT CGCTGGAGCA GGCGCTGGAG TTCATCGATG ACGACGAACT GGTTGAAGTA 
ACGCCGACTT CTATCCGTCT GCGTAAACGT CATCTGACGG AAAACGATCG TCGTCGTGCG 
AACCGTTCCG CCAAGGACGA GTAA 

 

Protein sequence

MIENLRNIAI IAHVDHGKTT LVDKLLQQSG TLGERNEATE RVMDSNDLEK ERGITILAKN 
TAINWNDYRI NIVDTPGHAD FGGEVERVMS MVDSVLLLVD AMDGPMPQTR FVTQKAFAYG 
LKPIVVINKV DRPGARPDWV VDQVFDLFVN LGATDEQLDF PIVYASALNG IAGLDHNDMA 
EDMTPLFEAI VKHVEAPKVD LNGPFQMQIS QLDYNNYVGV IGIGRIKRGV VKPNQQVSII 
DSEGKVRNGK VSQVLGHLGL QRIESSLAEA GDIIAITGLG ELNISDTICD TSCVEALPAL 
SVDEPTVTMY FCVNTSPFCG KEGKYVTSRQ ILDRLRKELV HNVALRVEET EDPDAFRVSG 
RGELHLSVLI ENMRREGFEL AVSRPKVIFR TIDGRRQEPF EQVTVDIEEQ HQGSVMEALG 
LRKGEMRDMI PDGKGRVRLD YVIPSRGLIG FRTEFMTMTS GTGLLYSTFS HYDDIRPGEI 
GQRQNGVLIS NGQGKAVAYA LFSLQDRGKL FLGHGAEVYE GQVIGIHTRS NDLTVNCLTG 
KKLTNMRASG TDEATVLVPP VKMSLEQALE FIDDDELVEV TPTSIRLRKR HLTENDRRRA 
NRSAKDE