Gene Dd1591_4102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_4102 
Symbol 
ID8120954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp4630377 
End bp4631990 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content52% 
IMG OID644854478 
Productsensory histidine kinase DcuS 
Protein accessionYP_003006378 
Protein GI251791657 
COG category[T] Signal transduction mechanisms 
COG ID[COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAA AAAAGACACC GCTGAAGTTA GGCACGTCGA TTATTCTGAT GGTGTCGGCG 
GTGATTGGCT CCGTACTGCT GGTGGTTTAC GCGCTGCTGT TTTTCCGTAT TACCGAACTG
ACCGAAACGC ACCTCAAAGA TAAAGCTTTT GCGATTGCCC GCACGGTTGC CAATTCGCCG
CTCGTGGTGA ATGACCTGAA AGGCATCGGC GACCCGATGC TGGTACAAAA CTTTTCCGAG
AATGTGAAAA GCCGCAACCA CCTGTTGTTT GTGATTGTGA CCGATATGGG CGGCATCCGT
CATTCTCACC CGGAGCCGGG GCAGATCGGC CGTCACTTTA TCGGCGATGA TCTCTACCCG
GCGTTGCTGG GGTTGGAGAA TACGGCGGTG AATCGCGGGG TATTGGACCC GGCGCTACGC
GTGTTTACGC CGGTATTTGA CGAAAATAAC CGCCAACTCG GTGTGGTCGT GGTGGGGATT
TCGCTTTCCA GCGTACAGTC CGTCATCAAT GAGAATCGTT GGATTATTCC CTGGACCATT
CTGTTTGGCG CGCTGGTCGG CCTGCTGGGC ACCTATTTCC TGGTGAAAAC CCTTAAACGC
ATCATGCTGG GGTTTGAACC GTTCGAGATT TCCAATCTGT TTGAGCAGCG TAATGCGATG
CTCAAACAAA TCAAGGAAGG GGTGATCGCG GTCGATACCG ACTTGCGCGT TACCATCATC
AACGACGAAG CCAAGCGGTT GTTCAGCCAG CATGGTTCCG GTGAAACGCT GGCGATCGGC
AGCACGATTA GCCACTGGCC GGCGTTGATG AATCTGGAAA AGGTGCTGGA GTCCGGTGCG
CCGCGGCAGG ACGAAGAAAT CAATTTCAAC GGCAACCTGC TGCTGATTAA CACCGTACCG
GTGGTGGTGA AGGGCGATAT CATCGGCGCC ATCGCCACCT TCCGTGATAA AACGGAAGTC
AGCCAGTTGC TGCAACGCCT GACCGGGATG TCGTATTACG CCGACGCCTT GCGCGCTCAG
TCGCATGAAT TCATGAATAA ACTGCATGTG ATTCTCGGGA TGCTACATTT GAAATATTAC
CCGCAGCTGG AAGAATATAT TTTAAAAACC GCCAATAATT ATCAGGCGGA AATCGGTTCG
ATTATCCGAA AAGTAAAATC GCCGGTGATT GCCGGGTTCC TGTTGGGTAA AATCAACCGT
GCGCGGGATC TGGGCGTCAC GTTGTCCATC AGCGAAGACA GCCTGTTGCC GGATACCGAC
GATTCGCAGT CCACCAATGA ATTGATTACC GTGCTGGGTA ATCTCATCGA AAATGCGATG
GATGCCTTAT CCGGTCTGGA AAACCGTGAG ATTACCGTGA CGTTCCATCA TCAGGATGGG
CAGTTGCACT GCACGGTCAG TGACGACGGA CCGGGCATTG CGCCGGATAT TCAGCAGCGT
ATTTACCAGG AAGGGTTTTC CACCAAAGGC TCCGGGCGCG GCATCGGCCT GTATCTTACC
CGGCAGAGTC TGGAGAAAAT CGGTGGTACC ATCGATTTTG AATCCGAACC GGACGTTTAT
ACCCAGTTTT TTGTGAATAT CCCTTATCAA GCAAGGCAGT TTGACCATGA TTAA
 
Protein sequence
MSKKKTPLKL GTSIILMVSA VIGSVLLVVY ALLFFRITEL TETHLKDKAF AIARTVANSP 
LVVNDLKGIG DPMLVQNFSE NVKSRNHLLF VIVTDMGGIR HSHPEPGQIG RHFIGDDLYP
ALLGLENTAV NRGVLDPALR VFTPVFDENN RQLGVVVVGI SLSSVQSVIN ENRWIIPWTI
LFGALVGLLG TYFLVKTLKR IMLGFEPFEI SNLFEQRNAM LKQIKEGVIA VDTDLRVTII
NDEAKRLFSQ HGSGETLAIG STISHWPALM NLEKVLESGA PRQDEEINFN GNLLLINTVP
VVVKGDIIGA IATFRDKTEV SQLLQRLTGM SYYADALRAQ SHEFMNKLHV ILGMLHLKYY
PQLEEYILKT ANNYQAEIGS IIRKVKSPVI AGFLLGKINR ARDLGVTLSI SEDSLLPDTD
DSQSTNELIT VLGNLIENAM DALSGLENRE ITVTFHHQDG QLHCTVSDDG PGIAPDIQQR
IYQEGFSTKG SGRGIGLYLT RQSLEKIGGT IDFESEPDVY TQFFVNIPYQ ARQFDHD