Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_4100 |
Symbol | |
ID | 8120952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 4628142 |
End bp | 4629494 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644854476 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_003006376 |
Protein GI | 251791655 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.720955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGCAGA AAACACATCG TGGCCCTGAA GCAGGAAAAA GGGGTGAAGC CCTGAACGTC GGTGCTCAGG GGGCTGAAAC CGTGCAGGCA CCACCGAATG GAGAAAGTCC GTCGTCAACA GCATGGCTGA TGGAAGCCAT CTGTGAACCA GTCAATCTCA GGCAAGCCCT GAAGCGGGTA AAGGCCAACA AAGGCGCGTC AGGTGTAGAG GGTATGAGCG TAAGCGAATT GCCGGACTAT CTGAAGCATC ACTGGCCGGA ACTGAAAGCG CAACTGCTGT CCGGCAGCTA CTGCCCATCG CCAGTGAGAA GAGTGACCAT CCCGAAACCC GGTGGCGGCG AACGCCTGCT GGGTATTCCG ACGGTGGTGG ATCGTTTTGT CCAGCAGGCG ACGATGCAGG TGTTGCAGAG GCAATGGGAT GCGTCGTTCA GCGACAGCAG CTACGGGTTC CGCCCCGGCC GTTCGGCCCA TCAGGCAGTG AAACAGGCTC AGGGCTATAT CGGTTCAGGG CATCACTGGG TAGTTGACCT TGATCTGGAG AAGTTCTTCG ACAGGGTGAA CCACGATGTG CTGATGAGTC GGGTTGCAAA ACGGGTGTCG GACAAACGGG TGCTGTCACT TATCCGTGGG TTCCTGAATG CAGGCGTGAT GGAAGCAGGG CTGGTAAGTC CGGTGACGGA AGGGATGCCG CAGGGCGGCC CTCTGTCGCC GCTGTTATCA AATCTGTTGC TGGACGACTT CGATAAGGAA CTGGAGAAAC GAGGCCTGAA GTTCGCCCGT TACGCAGACG ACTGCAACAT CTATGTGAAA AGCGAGCGTG CAGGCAACCG AGTGATGGAG GGGCTGACGC ACTGGCTGAG CCGGAAGCTG AAGCTGAAGG TCAACGCGAA GAAGAGCGCG GTAGCGCATC CGGCTATGCG TAAGTTCCTG GGTTACAGCT TCAGGGTAGG CAGGAAGGTA TGGTGCGTGG TGTCGCCGGA ATCGGTAAAG CGGTTTAAAA CGCGGGTAAG GGAACTGACG GGGCGCAACA CGGGAAGAAG CCTCGAGCAG CTAATCCAGC CGTTAAAGCG ATACCTGACG GGCTGGAAAA GCTACTATGG TCTGAACGAG TGGCCGTCGC TGATGCGACC GCTCAACATG TGGATAAGGC GTAGGCTGCG AAGTGTGCTG TGGAAACAGT GGAAAACGGG CGGCAAGCGT TTTAACGCGC TGCGAGCGAG GGGAATAAGT AAAGACCTAG CAGCGCAGAC GGTAGGAAGC TGTCATAAAC AGTGGCGGAT AAGTTGCAGC CCGGCGCTGA ATATGTCGCT ACCGAATAGT CTGTTCCGAG GACTGGGCCT GCCGGAGTTA TAG
|
Protein sequence | MQQKTHRGPE AGKRGEALNV GAQGAETVQA PPNGESPSST AWLMEAICEP VNLRQALKRV KANKGASGVE GMSVSELPDY LKHHWPELKA QLLSGSYCPS PVRRVTIPKP GGGERLLGIP TVVDRFVQQA TMQVLQRQWD ASFSDSSYGF RPGRSAHQAV KQAQGYIGSG HHWVVDLDLE KFFDRVNHDV LMSRVAKRVS DKRVLSLIRG FLNAGVMEAG LVSPVTEGMP QGGPLSPLLS NLLLDDFDKE LEKRGLKFAR YADDCNIYVK SERAGNRVME GLTHWLSRKL KLKVNAKKSA VAHPAMRKFL GYSFRVGRKV WCVVSPESVK RFKTRVRELT GRNTGRSLEQ LIQPLKRYLT GWKSYYGLNE WPSLMRPLNM WIRRRLRSVL WKQWKTGGKR FNALRARGIS KDLAAQTVGS CHKQWRISCS PALNMSLPNS LFRGLGLPEL
|
| |