| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_4049 |
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| Symbol | |
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| ID | 8119648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 4573246 |
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| End bp | 4573719 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644854426 |
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| Product | type VI secretion system effector, Hcp1 family |
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| Protein accession | YP_003006326 |
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| Protein GI | 251791605 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTCATG TAATTTATCT TACGCTAGAA GGTGATCAGC AAGGGCTAAT TTCTTCAGGG
TGTTCAACAT TAGACTCTAT TGGCAATCGT TATCAGCAAG GGCATGAAAA CCAAATACAG
GTGTTGGGGT TAAATCATAC GATAACCCGA GAGGAGAATG TTGCTCATCA TCCTATACAG
TTGATTAAGC CAATAGATAA GTCGTCACCT TTACTTGGTG TTTCTGTAAC ATCAAATGAG
TCGCTCACTG CTAATTTTTT CTTTTATAGA ACAAATCAAG CAGGGCAATT AGAGGTTTTT
TATGAGTTAA AACTTACCGA TGCTAGAATT GTAGAGGTAT CAGCGAGTTA CCCTCACTCA
TTAAATGATA ATGGTTCTTT ACCCTATGAG GTCGTTATGC TCAAGTATAA AACTATAGCA
TGGAACCATA AAACTGCAGG TACATCAGGA TATAGCATAT GGAGTGATAG TTAA
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| Protein sequence | MSHVIYLTLE GDQQGLISSG CSTLDSIGNR YQQGHENQIQ VLGLNHTITR EENVAHHPIQ
LIKPIDKSSP LLGVSVTSNE SLTANFFFYR TNQAGQLEVF YELKLTDARI VEVSASYPHS
LNDNGSLPYE VVMLKYKTIA WNHKTAGTSG YSIWSDS
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