| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3991 |
|---|
| Symbol | |
|---|
| ID | 8119590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 4509091 |
|---|
| End bp | 4509993 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644854370 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003006270 |
|---|
| Protein GI | 251791549 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.368526 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTTT TGGTCTCACG AGCCTGGTTG CTCGACGAAA CGCCCGCCAC ACGCCGTCAG
GCGGTGTGGG GGCAGCGTTA CCGCCTGTGG CTGGGGTTTC GCGCCAATCC GCTGGCGATG
TTAGGGTTGA TCATCATCGC GGTGGTGATG CTGCTGGCAC TGGCGGCACC CTGGCTGGCA
CCCTACGACC CTGGCTTTCA GAACCTGTCT AACCGGCTGG CCGCGCCGTC TGCGGCGCAC
TGGTTGGGCA CCGATGAACT GGGGCGCGAT GTGTTCAGCC GTATCGTTTA CGGCGGGCGC
ACCACGCTGG GTATGGTGCT TGCGGTGGTG GCGCTGACCG CGCCCATCGG CCTGCTGGTC
GGCTGTATCG CCGGTTATGC CGGCGGTTGG CTGGATAAAA TCCTGATGCG GCTGACCGAC
ATCTTTCTGG CGTTCCCGCG GCTGGTGCTG GCACTGGCGT TTGTCGCGGC GCTGAAACCG
GGGGTGGAAA GCGCCATTCT GGCGATCGCG CTGACCGCCT GGCCGCCGTA TGCGCGGCTG
GCGCGGGCGG AAACGCTGCA ATTCCGCCAT ACCGATTTTA TCGCCGCCAG CCGCCTGACC
GGTGCCGCGC CGCTGCGCAT TATTCTGCGC CACATTATGC CGTTGTGCGT GCCGAGCCTG
ATTGTGCGGG TGACGCTGGA TATGAGCTCC ATCATCATCA CCGCCGCCAG TCTGGGCTTT
CTTGGTATGG GGGCACAGCC GCCGTCACCG GAGTGGGGCA CGATGATCGC CACTGCGCGT
CGTTTCCTGT TCAACGCCTG GTGGGTGCCG CTGGTGCCCT GTATCGCCAT TTTCCTGACC
TCGCTGGCCT TCAACTTTTT GGGTGATGGC CTGCGTGATG TGCTGGACCC GAAGGAGCGC
TAA
|
|---|
| Protein sequence | MSFLVSRAWL LDETPATRRQ AVWGQRYRLW LGFRANPLAM LGLIIIAVVM LLALAAPWLA
PYDPGFQNLS NRLAAPSAAH WLGTDELGRD VFSRIVYGGR TTLGMVLAVV ALTAPIGLLV
GCIAGYAGGW LDKILMRLTD IFLAFPRLVL ALAFVAALKP GVESAILAIA LTAWPPYARL
ARAETLQFRH TDFIAASRLT GAAPLRIILR HIMPLCVPSL IVRVTLDMSS IIITAASLGF
LGMGAQPPSP EWGTMIATAR RFLFNAWWVP LVPCIAIFLT SLAFNFLGDG LRDVLDPKER
|
|---|
| |