Gene Dd1591_3964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3964 
Symbol 
ID8117569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp4482864 
End bp4483505 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content57% 
IMG OID644854343 
Productorotate phosphoribosyltransferase 
Protein accessionYP_003006243 
Protein GI251791522 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00559103 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCCT ATCAGCGTCA GTTTATCGAA TTCGCACTGA GCAAGCAGGT TCTGAAGTTC 
GGCGAATTTA CCCTGAAATC CGGGCGTATC AGCCCCTATT TCTTTAATGC CGGGCTGTTT
AATACCGGGC GCGATCTGGC GTTGTTGGGG CGTTTCTATG CCGAGGCGTT GGTGGATGCC
AACGTGGCGT TCGACGTCCT GTTCGGGCCT GCCTACAAAG GCATTCCGAT TGCGACCACG
ACGGCGGTGG CGCTGGCGGA ACACCATGAC CGTGATGTGC CTTACTGTTT CAACCGTAAA
GAAGCCAAGG ATCATGGCGA AGGCGGCAAT CTGGTCGGTA GCCCGCTGAA AGGCCGTATT
ATGCTGGTGG ACGATGTGAT TACCGCCGGC ACCGCTATCC GCGAATCTAT GGAGATCATC
GCTGCGCAGG GCGCCTCGCT TGCGGGGGTG TTGATTGCGT TGGACCGTCA GGAGCGCGGA
CGCGGCGAGT TATCCGCGAT CCAGGAAGTC GAACGCGATT ACCAGTGCAA CGTCACGTCG
ATCATTACGC TGGGGGATCT GATTAGCTGG CTGACGGAAA AACCGGAAAT GGCCGCACAT
CTGGAAGCAG TAAACGCCTA TCGTGCGCAG TACGGCGTAT AA
 
Protein sequence
MKAYQRQFIE FALSKQVLKF GEFTLKSGRI SPYFFNAGLF NTGRDLALLG RFYAEALVDA 
NVAFDVLFGP AYKGIPIATT TAVALAEHHD RDVPYCFNRK EAKDHGEGGN LVGSPLKGRI
MLVDDVITAG TAIRESMEII AAQGASLAGV LIALDRQERG RGELSAIQEV ERDYQCNVTS
IITLGDLISW LTEKPEMAAH LEAVNAYRAQ YGV