Gene Dd1591_3963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3963 
SymbolslmA 
ID8117568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp4482220 
End bp4482816 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content55% 
IMG OID644854342 
Productnucleoid occlusion protein 
Protein accessionYP_003006242 
Protein GI251791521 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000172432 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAGA AAGAAAATAC GAAAAGGAAC CGCCGCGAGG AAATTCTGCA GGCACTGGCG 
CAAATGCTGG AATCCAGCGA CGGCAGTCAA CGTATCACCA CCGCCAAACT GGCCGCCACC
GTCGGTGTTT CAGAAGCCGC GCTTTACCGG CATTTTCCCA GCAAAACGCG GATGTTTGAC
AGCCTGATCG AATTTATTGA AGACAGCCTG ACCACCCGCA TCAACCTGAT CCTGCAGGAT
GAAAAAGACA CCTTTAATCG GCTACGGCTG ATTTTATTGC TGATTCTCGG CTTTGCGGAG
AAAAACCCCG GTTTGACGCG TATTCTCACC GGTCATGCGC TGATGTTCGA ACAAGACCGA
CTGCAAGGGC GCATCAACCA GTTGTTTGAC CGCATTGAAT CTCAGTTGCG CCAGGTACTG
CGCGAACATA AGCTGCGCAG CGGCGAAGGG TTCCGCCATG ATGAAACGCT GCTGGCCAGC
CAGTTGCTGG CATTCTGCGA AGGTCTGCTC TCGCGCTTTA CCCGCTCCGA GTTCCGCTCC
CTGCCGACGC AGGATTTCGA GACGCGTTGG CCGCTGCTGG CGGCCCAGCT TCAGTAA
 
Protein sequence
MAEKENTKRN RREEILQALA QMLESSDGSQ RITTAKLAAT VGVSEAALYR HFPSKTRMFD 
SLIEFIEDSL TTRINLILQD EKDTFNRLRL ILLLILGFAE KNPGLTRILT GHALMFEQDR
LQGRINQLFD RIESQLRQVL REHKLRSGEG FRHDETLLAS QLLAFCEGLL SRFTRSEFRS
LPTQDFETRW PLLAAQLQ