| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3946 |
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| Symbol | rfaD |
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| ID | 8117551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 4466027 |
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| End bp | 4466959 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644854325 |
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| Product | ADP-L-glycero-D-mannoheptose-6-epimerase |
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| Protein accession | YP_003006225 |
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| Protein GI | 251791504 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTATCG TAACTGGCGG CGCCGGCTTC ATCGGCAGCA ACATCGTAAA GGCGCTGAAT
GATGACGGAT ACCGGGATAT TCTGGTGGTC GACAACCTGA AGGATGGCAC CAAGTTCGTC
AATCTGGTCG ATCTGGACAT CGCCGACTAC ATGGATAAGG AAGATTTCAT CGCCAGTATC
GTAGCCGGTG ACGACCTGGG CGATATCGAT GCTATTTTCC ATGAAGGCGC TTGCTCATCC
ACCACTGAGT GGGATGGCAA GTACATGATG GATAACAACT ATCAGTACTC CAAAGAGGTA
CTGCACTACT GTCTGGAACG CGGCATCCCG TTCCTGTATG CCTCTTCCGC CGCCACCTAC
GGCGGTCGCA CCGACAACTT TGTGGAAGAC CGCCGCTACG AGCAGCCGCT GAACGTCTAT
GGTTACTCCA AATTCCTGTT TGACCAGTAT GTACGCGAGA TCCTGCCGCA AGCCGACTCC
CAGATTTGCG GCTTCCGCTA CTTTAACGTC TACGGGCCGC GCGAAAGCCA CAAAGGCAGC
ATGGCAAGCG TCGCGTTCCA CCTGAACAAT CAGATCAATC AGGGTGAAAA CCCGAAATTG
TTCGCCGGCA GCGAAAATTT CAAACGCGAC TTCATTTATG TCGGTGATGT GGCCGCCGTC
AATCTGTGGT TCTGGCAGCA TAATGTTTCC GGCATCTTCA ACTGCGGCAC CGGCCGTGCC
GAATCCTTCC AGGCGGTGGC CGATGCGGTG CTGGCCTGGC ACCACAAAGA CAGCGTGGAA
TACATCCCTT TCCCGGAAAA ACTGAAAGGT CGTTATCAGG CCTACACGCA GGCAGACCTG
ACCAATCTGC GCGCCGCCGG TTACGACAAA CCGTTCAAAA CCGTAGCTGA AGGGGTGGCC
GACTATCTGG CCTGGCTGAA CCGCAAAGCC TGA
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| Protein sequence | MIIVTGGAGF IGSNIVKALN DDGYRDILVV DNLKDGTKFV NLVDLDIADY MDKEDFIASI
VAGDDLGDID AIFHEGACSS TTEWDGKYMM DNNYQYSKEV LHYCLERGIP FLYASSAATY
GGRTDNFVED RRYEQPLNVY GYSKFLFDQY VREILPQADS QICGFRYFNV YGPRESHKGS
MASVAFHLNN QINQGENPKL FAGSENFKRD FIYVGDVAAV NLWFWQHNVS GIFNCGTGRA
ESFQAVADAV LAWHHKDSVE YIPFPEKLKG RYQAYTQADL TNLRAAGYDK PFKTVAEGVA
DYLAWLNRKA
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