| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3907 |
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| Symbol | rfaH |
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| ID | 8117512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 4420814 |
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| End bp | 4421302 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644854286 |
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| Product | transcriptional activator RfaH |
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| Protein accession | YP_003006186 |
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| Protein GI | 251791465 |
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| COG category | [K] Transcription |
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| COG ID | [COG0250] Transcription antiterminator |
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| TIGRFAM ID | [TIGR01955] transcriptional activator RfaH |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.519229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGAGCCT GGTACTTACT TTATTGCAAG CGCGGCCAAC TATTACGGGC CAAAGAACAT
CTGGAACGTC AGGACGTGGT CTGCCTGAGC CCGATGATTG CGCTGGAGAA AATCGTACGA
GGGAAGCGAA CCGAGGTCAG TGAACCGTTG TTCCCCAATT ACCTGTTCGT CGAGTTCGAC
CCGGAGCACA TACATACCAC CACCATCAGC GCCACTCGCG GCGTCAGTCA TTTTGTCCGT
TTCGGCAGCC TGCCGGCACT CGTCCCCCAG CAGGTGATTG ACGATTTGCA GAACCATCAA
TGCACGCCTC ACATCGCCCC TGAAACGCCG CAACCCGGCG ATCACGTCAC CATCACCGAA
GGGGTGTTCA GCGGCCTTCA GGCCATTTAT ACCGAACCGG ATGGCGAAGC GCGCTCCATG
CTGTTGCTCA ATCTGCTGAA CAAACAGGTT CGGCAAAGCA TCGACAACCG CCAGTTTCGA
AAAGCGTAA
|
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| Protein sequence | MRAWYLLYCK RGQLLRAKEH LERQDVVCLS PMIALEKIVR GKRTEVSEPL FPNYLFVEFD
PEHIHTTTIS ATRGVSHFVR FGSLPALVPQ QVIDDLQNHQ CTPHIAPETP QPGDHVTITE
GVFSGLQAIY TEPDGEARSM LLLNLLNKQV RQSIDNRQFR KA
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