Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3906 |
Symbol | |
ID | 8117511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 4419117 |
End bp | 4420613 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644854285 |
Product | UbiD family decarboxylase |
Protein accession | YP_003006185 |
Protein GI | 251791464 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.462133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAGCA TGAAATACCG TGACTTACGT GAATTTCTCG CTCAGCTTGA GGCGAGAGGC GAGCTCAAAC GCATCCATCA GCCGATAGAT CCCTACCTGG AAATGACCGA AATTGCCGAT CGCACCTTGC GTGCCGGCGG CCCGGCGCTG TTATTTGAAA ATCCGAAAGG TTACGGTATG CCGGTGTTGT GCAACCTGTT CGGTACGCCT AAACGCGTGG CGCTGGGAAT GGGGCAGGAA GAGGTCGGCG CGTTGCGTGA TGTCGGTCGC TTGTTGGCAT TTTTAAAAGA GCCGGAGCCG CCGCGTGGTT TTCGTGACCT GGTGGATAAG CTACCTAAAT TTCGCCAGGT GCTTAACATG CCGACCAAAC GGCTGTCGAG CGCGCCCTGC CAGGAGCAGG TATGGGAGGG CGATGAGGTG GATCTGGGCC GAATTCCGAT CATGCATTGC TGGCCGGGCG ATGTGGCGCC GTTGGTCACC TGGGGACTGA CGGTAACGCG CGGGCCTTTC AAAGAGCGCC AGAATCTGGG GATTTACCGT CAGCAACTGA TTGGCCGCAA CAAACTGATT ATGCGCTGGT TGTCACACCG CGGCGGTGCG CTGGATTTTC AGGAGTGGCG TCAGCAACGC CCCGGCGAGC GTTTCCCGGT GGCGGTCGCG TTGGGCGCAG ATCCGGCTAC AATTCTGGGC GCGGTGACGC CGGTGCCGGA TACGTTATCT GAATATGCTT TTGCCGGGTT ACTGCGTGGT CACAAGACCG AAGTCGTGAA ATGCCTGTCC TGCGATCTGG ACGTACCGGC CAGCGCCGAA ATCGTGCTGG AAGGCTATAT CGACGTGGAT GAAACGGCGC CGGAAGGCCC TTATGGCGAT CACACCGGTT ATTACAATGA AGTCGACCAT TTCCCGGTGT TTACCGTAAC TCACGTGACC CAGCGGCGCG ACGCGATTTA TCATTCCACT TATACCGGTC GCCCGCCCGA TGAGCCTGCC GTTCTGGGCG TGGCGCTGAA TGAAGTGTTC GTGCCGCTGC TGCAAAAGCA GTTTCCGGAA ATCGTCGACT TTTATCTGCC GCCGGAGGGC TGTTCTTACC GGCTGGCTGT CGTTACTATG AAAAAACAGT ATGCCGGTCA TGCCAAACGG GTGATGATGG GCGTCTGGTC TTTTTTACGC CAGTTCATGT ATACCAAATT CGTTATTGTC TGTGATGACG ATATTGATGC CCGCGACTGG AAAGATGTGA TTTGGGCAAT CACCACACGT ATGGATCCGG CGCGTGATAC GCTGTTGGTT GAAAATACGC CGATTGATTA TCTGGATTTT GCTTCACCGG TCTCCGGGCT TGGCTCCAAA ATGGGGCTGG ATGCAACGAA TAAATGGCCG GGTGAAACGC AGCGTGAATG GGGTCACCCT ATTACCAAAG ATCCGTCGGT TGTCGCCCGT GTGGACGCCA TATGGGACGA ATTGGCCATA TTGAATGACA GTGGTAAGCC GCACTGA
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Protein sequence | MISMKYRDLR EFLAQLEARG ELKRIHQPID PYLEMTEIAD RTLRAGGPAL LFENPKGYGM PVLCNLFGTP KRVALGMGQE EVGALRDVGR LLAFLKEPEP PRGFRDLVDK LPKFRQVLNM PTKRLSSAPC QEQVWEGDEV DLGRIPIMHC WPGDVAPLVT WGLTVTRGPF KERQNLGIYR QQLIGRNKLI MRWLSHRGGA LDFQEWRQQR PGERFPVAVA LGADPATILG AVTPVPDTLS EYAFAGLLRG HKTEVVKCLS CDLDVPASAE IVLEGYIDVD ETAPEGPYGD HTGYYNEVDH FPVFTVTHVT QRRDAIYHST YTGRPPDEPA VLGVALNEVF VPLLQKQFPE IVDFYLPPEG CSYRLAVVTM KKQYAGHAKR VMMGVWSFLR QFMYTKFVIV CDDDIDARDW KDVIWAITTR MDPARDTLLV ENTPIDYLDF ASPVSGLGSK MGLDATNKWP GETQREWGHP ITKDPSVVAR VDAIWDELAI LNDSGKPH
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