| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3901 |
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| Symbol | fadB |
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| ID | 8118866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 4413631 |
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| End bp | 4415820 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644854280 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_003006180 |
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| Protein GI | 251791459 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.143113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTATC AAGGCGACAC GCTGTACCTT AACTGGCTGG AAGACGGCAT TGCCGAACTG
GTTTTTGCCG CACCCGGCAG CGTCAACAAG CTGGATACCC GCACCGTAGC CAGTCTTGGC
GAAGCCCTGA ATCACCTGAC GCACCAGCCC TCACTCCGCG CGCTGCTACT GCGCTCGGAT
AAACCCGCCT TCATTGCCGG AGCGGACATC ACCGAATTCC TGTCGCTGTT TGCCGCCCCG
CCGGAAGCGC TGCATCAGTG GCTGACCGAA GCCAACGCCA TTTTCAGCCG ACTGGAGGAT
TTGCCGGTGC CGACGTTATC CGCCATCAAC GGCTATGCGC TGGGCGGAGG ATGCGAATGC
GTGCTGGCGA CCGATTTCCG TCTTGCAACG CCTGATGCGC GCATCGGCCT GCCGGAAGTC
AAACTGGGTA TCATGCCGGG ATTTGGCGGC ACGGTTCGAT TGCCGAGGCT GCTGGGCGCG
GACGGCGCGC TGGAAATCAT CACTGCGGGT AAAGACCTGT CTGCCGGCGA GGCTCTGAAA
GCCGGGCTGG TGGATGCGAT AACAGACAGC GACAAGCTGC TGTCTTCCGC CCTGCATATG
TTGCGTCTGG CGGCAGAGGA TAAACTGGAC TGGCGTGCCC GTCGCCGTCA GAAACAATCG
CCGCTACGAC TTAACCGTAT CGAAGCCACC ATGAGTTTTG CTACCGCCAA CGCGCTGGTG
CAACAGGCGA CAGGCCGCCA CTACCCCGCA CCGATGATGG CGCTCAAAAC CATCGAAGCC
GCCGCCGGAT TACAGCGAGA CGCCGCGCTA AAGCTCGAAA CCGATAATTT CGTCGCGCTG
ACTCAAACCA CCGCAGCATA TGCGTTGGTC GGTGTATTCC TTAATGAGCA GGCGGTAAAA
AGCGCCGCCA AAAAATGGGC TGCCGATGCC TCACCGCCGG CTCGCGTTGC CGTACTCGGC
GCCGGGATCA TGGGCGGCGG CATTGCCTGC CAGTCGGCAC GCAAAGGGGT GCCGGTGTGG
ATGAAAGATA TCAGTGAAAA AGCGCTGACA CTGGGGATGG AGGAAGCAGC CAAGCTGCTT
AACGCGCAGT TGGAACGCGG CAAATTGGAC GCCATGAGCA TGGCGGGGGT GCTGGCCCGT
ATTCACCCGA CACTCAATAA CAACGGGCTT GAACAGGCTG ACCTGATTAT CGAAGCCGTC
GTAGAAAATC CGCAGGTAAA AGCCAGGGTG CTGGCCGATA TCGAAGCCTA TGTCAGCGAA
CAAACGTTGA TTGTTTCCAA TACGTCGACG ATTCCCATCG GGCACTTAGC CGCCGCCTTG
CAGCGGCCGC AAAATTTCTG CGGGATGCAC TTTTTCAACC CGGTACACCG GATGCCGCTG
GTGGAAGTGA TTCGCGGCCC CCAGACCGAC GAGAAAACGC TGGCCCGCGT GGTGGCCTTC
GCCAGTAAGA TCGGCAAAAC CCCGATCGTG GTGAACGACT GCCCGGGATT CTTCGTCAAC
CGCGTGCTGT TTCCCTACAT TGCCGCCTTC AACCTGCTGA TGCGCGACGG CGCGGATTTC
CGCGATGTGG ACGCGGTGAT GGAGAAACAG TTCGGTTGGC CGATGGGGCC GGCTTACCTG
CTGGACGTCG TCGGGCTGGA TACCGCTCAC CACGCGCAGG CGGTAATGTC GGCAGGCTTT
CCCCAGCGTA TGGCGAAAAC CTATCGCGAT GCGGTCGATG TGCTGGTGGA ACACCAGCGT
TTCGGTCAGA AGAGCGGCGC GGGCTTCTAC CGCTACTATC CGGATGCCAA AGGCAAACCA
CACCGCGAGC AGGACGAACA GACCGATATC TTGCTGGATG CGGTCTGCGA GCCGAAGCGA
ACCTTCCGTG CACAAGAGAT TATCCATCGC CTGATGGTGC CGATGCTCAA CGAAGTGGCG
CGTTGTCTGG AAGAAGGCAT CGTCGCCACC CCGGCGGAAG CCGACATGGC GCTGCTTTAC
GGCCTGGGTT TCCCGCCATT CCACGGCGGC GCCTGCCGTT ATCTGGATAC ACTGGGCAGC
CAGCGCTATG TCGACATCGC CCGGTCGCTG GCGTCGTTGG GGCCGCTTTA CGCCATACCG
GAAAGCCTGT TGCAGATGGC GCAACGCCAA CAGCGCTATT ACCCGGTGGT TGAACCTCAC
AGCAACCTTT CTCTTCATCA ACCGGCATAA
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| Protein sequence | MIYQGDTLYL NWLEDGIAEL VFAAPGSVNK LDTRTVASLG EALNHLTHQP SLRALLLRSD
KPAFIAGADI TEFLSLFAAP PEALHQWLTE ANAIFSRLED LPVPTLSAIN GYALGGGCEC
VLATDFRLAT PDARIGLPEV KLGIMPGFGG TVRLPRLLGA DGALEIITAG KDLSAGEALK
AGLVDAITDS DKLLSSALHM LRLAAEDKLD WRARRRQKQS PLRLNRIEAT MSFATANALV
QQATGRHYPA PMMALKTIEA AAGLQRDAAL KLETDNFVAL TQTTAAYALV GVFLNEQAVK
SAAKKWAADA SPPARVAVLG AGIMGGGIAC QSARKGVPVW MKDISEKALT LGMEEAAKLL
NAQLERGKLD AMSMAGVLAR IHPTLNNNGL EQADLIIEAV VENPQVKARV LADIEAYVSE
QTLIVSNTST IPIGHLAAAL QRPQNFCGMH FFNPVHRMPL VEVIRGPQTD EKTLARVVAF
ASKIGKTPIV VNDCPGFFVN RVLFPYIAAF NLLMRDGADF RDVDAVMEKQ FGWPMGPAYL
LDVVGLDTAH HAQAVMSAGF PQRMAKTYRD AVDVLVEHQR FGQKSGAGFY RYYPDAKGKP
HREQDEQTDI LLDAVCEPKR TFRAQEIIHR LMVPMLNEVA RCLEEGIVAT PAEADMALLY
GLGFPPFHGG ACRYLDTLGS QRYVDIARSL ASLGPLYAIP ESLLQMAQRQ QRYYPVVEPH
SNLSLHQPA
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