Gene Dd1591_3875 details

Gene Information

• Locus tag: Dd1591_3875
• Symbol: thiH
• ID: 8118832
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 4378780
• End bp: 4379925
• Gene Length: 1146 bp
• Protein Length: 381 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 644854246
• Product: thiamine biosynthesis protein ThiH
• Protein accession: YP_003006154
• Protein GI: 251791433
• COG category: [H] Coenzyme transport and metabolism; [R] General function prediction only
• COG ID: [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
• TIGRFAM ID: [TIGR02351] thiazole biosynthesis protein ThiH

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCTC ACTCTCAGCC GTCATTTGAA CAACGCTGGC AACAGCTGGA ATGGCACGAC 
CTGACGCTAC GCATCAACAG CAAAACCGAC GCCGACGTAG AACGGGCGTT ATGCGCGGAT 
CGACTCACGC GTGAAGATAT GATGGCGCTG CTGTCGCCCG CCGCCAGCCG CTGGCTGGAA 
CCACTGGCGC AACGGGCGCA ACAGCTGACG CGCCAGCGCT TCGGCAACAC CGTGAGTTTC 
TACGTACCGC TGTATCTCTC CAACCTGTGT GCCAACGACT GTACCTATTG CGGTTTTTCC 
ATGAGCAACC ACCTCAAACG CAAAACGCTG GACGAACCGG AGATCCTGCG CGAGTGCGAG 
GCGATCAAAT CGCTGGGATT CGATCACCTG CTGTTGGTGA CCGGCGAACA CCAACGCAAA 
GTGGGGATGG ACTATTTTCG CCGGATGCTG CCGTTGATTC GCCCGCAGTT CAGTTCAGTG 
ATGATGGAAG TGCAGCCGCT GTCGCAAGCG GAGTACGCCG AGTTGAAAAC CCTCGGGTTG 
GATGGGGTTA TGGTGTATCA GGAAACCTAT CACGCGGCGA CCTACGCCCG CCATCACCTG 
CGCGGCCACA AGCAGGATTT CGCCTGGCGG CTGGCAACGC CGGACAGGCT GGGGCGCGCC 
GGTATCGACA AGATCGGGCT GGGGGCGTTG ATCGGGCTGT CCGACAGTTG GCGTACCGAC 
TGCTATATGG TGGCCGAGCA CCTGCTGTAT TTGCAGCAAA CGTACTGGCA GAGCCGCTAT 
TCGGTGTCGT TCCCGCGCCT GCGCCCTTGT GCCGGCGGCA TCGAACCGGC TTCGCTGATG 
GATGAGGCGC AACTGATGCA GGTGATCTGC GCCTTCCGGC TACTGGCGCC CGATGTGGAG 
CTGTCGCTCT CCACCCGCGA GTCGCCGTTC TTCCGCGACC ACATGATCCC GGTAGCCATC 
AACAACGTCA GCGCGTTTTC CAAAACCCAA CCGGGCGGCT ACGCCGACGA TCATCCTGAA 
CTGGAACAAT TCACCCCGCA CGATAACCGC CGTCCGCAAG CGGTGGCCGA TGCCCTGACC 
CAGGCCGGTC TGCAACCGGT GTGGAAAGAC TGGGACGGTT ATCTGGGAAG GCCAGACGTC 
AACTAA 

 

Protein sequence

MSAHSQPSFE QRWQQLEWHD LTLRINSKTD ADVERALCAD RLTREDMMAL LSPAASRWLE 
PLAQRAQQLT RQRFGNTVSF YVPLYLSNLC ANDCTYCGFS MSNHLKRKTL DEPEILRECE 
AIKSLGFDHL LLVTGEHQRK VGMDYFRRML PLIRPQFSSV MMEVQPLSQA EYAELKTLGL 
DGVMVYQETY HAATYARHHL RGHKQDFAWR LATPDRLGRA GIDKIGLGAL IGLSDSWRTD 
CYMVAEHLLY LQQTYWQSRY SVSFPRLRPC AGGIEPASLM DEAQLMQVIC AFRLLAPDVE 
LSLSTRESPF FRDHMIPVAI NNVSAFSKTQ PGGYADDHPE LEQFTPHDNR RPQAVADALT 
QAGLQPVWKD WDGYLGRPDV N