| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3870 |
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| Symbol | |
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| ID | 8118827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 4374449 |
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| End bp | 4376416 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644854241 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_003006149 |
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| Protein GI | 251791428 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTACAG AACCCACCCA GTCTACGGAA CAGAATGTTT CCGGCGAAAA GAAATCCTCC
GGTCGTCGCG AACAACGCGC CGCGGCACAG CAATTTATCG ACACGCTGCG CGGCTCGACC
TTTCCTAACT CGCAGCGCAT TTACCTAAGC GGCTCACGCC CGGACATCCG TGTGCCGATG
CGGGAAATCC AGCTTAGCCC AACACTGCTG GGCGGTAGCC GCGATAATCC GCGCTATGAA
GCCAACGAGG CCATACCGGT CTATGATACC GCCGGACCGT ATGGCGACCC TGCCGTCACC
CCGGACGTAC ACCGTGGGCT CAGTAAACTG CGCGCCGGCT GGGTTGCGGA ACGCGACGAC
ACGGAAACCT TATCGCACGT CAGCTCCGGC TTTACCCAGC AACGGCTGGC GGATATCGGC
CTCGACCACC TGCGTTTTGA ACATCTGCCG CAGCCTAAGC GCGCCAAAGC GGGCCGTCGC
GTTACCCAGT TGCATTACGC CCGTCAGGGC ATCATCACGC CGGAAATGGA ATTCATCGCC
ATCCGCGAAA ACATGGGGCG CGAGCGCATT CGCGGCGAGG TTCTGCGCCG GCAGCATCCG
GGCCACAGTT TCGGCGCACT GCTGCCGGAC AACATCACGC CGGAATTCGT GCGTCAGGAG
GTCGCCGCCG GGCGCGCCAT CATCCCCGCC AACATCAACC ACCCGGAATC GGAACCGATG
ATCATCGGCC GTAATTTTCT GGTGAAGGTG AATGCGAATA TCGGCAACTC CGCCGTGACG
TCCTCCATCG AAGAAGAGGT CGAGAAACTA GTGTGGGCCA CGCGCTGGGG GGCAGACACC
GTAATGGATT TATCCACCGG GCGCTATATT CATGAAACCC GCGAGTGGAT CTTGCGCAAC
AGCCCGGTGC CGATCGGCAC GGTGCCTATC TATCAGGCGC TGGAAAAGGT CAACGGCATC
GCGGAAAACC TCACCTGGGA ACTGTTCCGC GACACCTTGC TGGAACAAGC CGAACAAGGG
GTGGACTACT TCACCATCCA CGCCGGCGTG CTGTTACGCT ATGTGCCGAT GACCGCCAAA
CGCCTGACTG GCATTGTGTC GCGCGGCGGT TCCATCATGG CGAAATGGTG CCTGTCTCAC
CATCAGGAAA ACTTCCTCTA CCAGCATTTC CGTGAAATCT GCGAAATCTG TGCCGCCTAT
GACGTCGCGC TGTCGCTGGG CGATGGCCTG CGCCCCGGCT CGATTCAGGA TGCCAACGAC
GAAGCGCAGT TCGCCGAACT GCACACGCTG GGCGAGCTGA CTAAAATCGC CTGGGAATAC
GACGTGCAGG TAATGATCGA AGGCCCCGGT CATGTGCCGA TGCAGATGAT CCGCCGCAAC
ATGACCGAAG AACTGGAGCA CTGCCACGAG GCGCCGTTCT ACACGCTGGG CCCGCTCACC
ACCGACATCG CACCCGGCTA CGACCATTTC ACCTCCGGCA TCGGCGCGGC GATGATCGGC
TGGTTCGGCT GCGCCATGCT GTGCTACGTC ACCCCGAAAG AGCATTTGGG GCTGCCGAAC
AAAAACGACG TCAAGCAGGG GCTGATCGCC TACAAGATCG CCGCTCATGC CGCCGATTTG
GCGAAGGGCC ACCCCGGCGC GCAGATCCGC GATAACGCCA TGTCCAAGGC ACGTTTTGAA
TTCCGCTGGG AAGATCAGTT CAATCTGGCG TTGGACCCGG AAACCGCCCG CGCCTACCAC
GACGAAACCC TGCCGCAGGA ATCCGGTAAA GTGGCGCATT TCTGCTCAAT GTGCGGACCG
AAATTCTGCT CGATGAAGAT CACACAGGAA GTGCGCGACT ACGCCGCCCG TCAGGAGGCA
CAGGCACAAC CGGTGGATGT CGGTATGGCG CAGATGTCCG CCGAATTCCG CGCCCGCGGC
AGCGAGTTGT ACCACACCGC CACCAGCCTG CCGCAGGAGG AACGCTGA
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| Protein sequence | MSTEPTQSTE QNVSGEKKSS GRREQRAAAQ QFIDTLRGST FPNSQRIYLS GSRPDIRVPM
REIQLSPTLL GGSRDNPRYE ANEAIPVYDT AGPYGDPAVT PDVHRGLSKL RAGWVAERDD
TETLSHVSSG FTQQRLADIG LDHLRFEHLP QPKRAKAGRR VTQLHYARQG IITPEMEFIA
IRENMGRERI RGEVLRRQHP GHSFGALLPD NITPEFVRQE VAAGRAIIPA NINHPESEPM
IIGRNFLVKV NANIGNSAVT SSIEEEVEKL VWATRWGADT VMDLSTGRYI HETREWILRN
SPVPIGTVPI YQALEKVNGI AENLTWELFR DTLLEQAEQG VDYFTIHAGV LLRYVPMTAK
RLTGIVSRGG SIMAKWCLSH HQENFLYQHF REICEICAAY DVALSLGDGL RPGSIQDAND
EAQFAELHTL GELTKIAWEY DVQVMIEGPG HVPMQMIRRN MTEELEHCHE APFYTLGPLT
TDIAPGYDHF TSGIGAAMIG WFGCAMLCYV TPKEHLGLPN KNDVKQGLIA YKIAAHAADL
AKGHPGAQIR DNAMSKARFE FRWEDQFNLA LDPETARAYH DETLPQESGK VAHFCSMCGP
KFCSMKITQE VRDYAARQEA QAQPVDVGMA QMSAEFRARG SELYHTATSL PQEER
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