| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3810 |
|---|
| Symbol | |
|---|
| ID | 8117243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 4310612 |
|---|
| End bp | 4311598 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644854177 |
|---|
| Product | D-arabinose 5-phosphate isomerase |
|---|
| Protein accession | YP_003006089 |
|---|
| Protein GI | 251791368 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation |
|---|
| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.109519 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACATT TCGAGTTACA ACCGGGTTTC GATTTCCAGA GCGCTGGTCG CCAGGTGTTA
TCCATCGAGC GCGATAGCCT CGCGCAGTTG GATCAATATA TTGACGACAA TTTCTCGCAG
GCCTGCGAGA AGATGTTTTA TTGCCGCGGT AAAGTCGTGG TGATGGGGAT GGGTAAATCG
GGGCATATCG GCTGCAAAAT GGCGGCGACG TTTGCCAGCA CCGGCACGCC GGCTTTCTTT
GTCCATCCCG GCGAAGCCAG CCACGGCGAT TTGGGCATGA TTACCGCGCA GGATATCGTG
ATCGCCATTT CCAACTCCGG CGAATCTCAT GAAATTCTGG CGCTGATTCC CGTACTGAAA
CGCCTGCAGG TGTGCCTTAT CTGCATGACC GGCAACCCGG AAAGCACCAT GGCGAAAGCG
GCGGATATCC ATCTTTGCGT TCACGTACCC CAGGAGGCCT GTCCGTTGGG TCTGGCGCCG
ACCTCCAGCA CCACCGCCAC GCTGGTGATG GGCGATGCGC TGGCCGTTGC GCTGTTGCAG
GCGCGCGGTT TTACCGCCGA AGATTTCGCC TTGTCGCACC CCGGCGGCGC ACTCGGCCGC
AAACTGCTGT TACGGATCAG CGATATCATG CACACTGGCG ACGAGATCCC TCGGGTTAGC
CGCGACGCGT CGTTGCGCGA TGCGCTGCTG GAGATTACCC GCAAGAATCT GGGAATGACG
GTGATTTGCG GCCAGGACGA TCGCATTGAA GGTATCTTTA CCGACGGCGA CCTGCGCCGG
GTGTTCGACA TGAATATCAA TCTCAACAGC GCCGGCATCG CCGATGTGAT GACGCGCGGC
GGTATTCGGG TGACGCCGCA CACACTGGCG GTGGATGCGC TGAATCTGAT GCAGTCGCGC
CACATTACCT CACTGCTGGT GGCGGAGAAT GATCGTCTGC TGGGGATTGT TCACATGCAC
GATATGCTGC GGGCGGGTGT GGTATAA
|
|---|
| Protein sequence | MSHFELQPGF DFQSAGRQVL SIERDSLAQL DQYIDDNFSQ ACEKMFYCRG KVVVMGMGKS
GHIGCKMAAT FASTGTPAFF VHPGEASHGD LGMITAQDIV IAISNSGESH EILALIPVLK
RLQVCLICMT GNPESTMAKA ADIHLCVHVP QEACPLGLAP TSSTTATLVM GDALAVALLQ
ARGFTAEDFA LSHPGGALGR KLLLRISDIM HTGDEIPRVS RDASLRDALL EITRKNLGMT
VICGQDDRIE GIFTDGDLRR VFDMNINLNS AGIADVMTRG GIRVTPHTLA VDALNLMQSR
HITSLLVAEN DRLLGIVHMH DMLRAGVV
|
|---|
| |