| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3470 |
|---|
| Symbol | |
|---|
| ID | 8117938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3943522 |
|---|
| End bp | 3944355 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644853846 |
|---|
| Product | dihydropteroate synthase |
|---|
| Protein accession | YP_003005761 |
|---|
| Protein GI | 251791040 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0294] Dihydropteroate synthase and related enzymes |
|---|
| TIGRFAM ID | [TIGR01496] dihydropteroate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.194075 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTGA ACGCTCGCGG ATTGACGTTG GATCTCTCTT GTCCCCAGGT TATGGGGATC
CTGAATGTAA CCCCTGACTC CTTTTCCGAT GGGGGAAAGC ACAATACCCT GAACGCCGCG
TTGATCCATG CTGAACAGAT GATCTCCGCG GGTGCGACTT TTATCGATGT TGGTGGCGAA
TCGACCCGTC CTGGGGCTGA TGAAGTCAGT ATCGAGGAGG AGTTGGACCG TGTTGTACCG
GTGGTAGAAG CATTAGCGCA ACGTTTTGAA GTCTGGATTT CAGTCGACAC TTCCAAACCT
GAAGTGATTA CCGCCAGTGC GCAAGCTGGC GCACATCTGA TCAATGATAT TCGAGCGCTA
AGAGAACCGG GAGCGTTAGA GGCGGCGGCG GCAACAGGTT TGCCTGTGTG TTTGATGCAT
ATGCAGGGAT TGCCAAAAAC CATGCAACAG ACGCCGCATT ATGACGATGT TGTGGGTGAG
GTCATGGCAT TTTTTGAGCA TCATATCGCC CGTTGTGTGG CTGCAGGTAT ACCGCGCGAA
CAGTTATTGC TGGACCCTGG GTTCGGGTTC GGCAAGAATT TACAGCACAA TTATCGACTG
TTGGGGCATC TGGAGACATT ACATCGCTGC GGTCTACCGC TGCTGGTTGG TATGTCCAGA
AAAACCATGC TCGGACAATT GCTGGGCGTT CCGCCGCTTG AGCGAGTTTA CGGCAGCGTG
GCGTGTGCGG TCATTGCCGC CATGAAAGGG GCCCATATTA TCCGCGTCCA TGATGTGAAG
GCGACGGTGG ATGCGATACG TGTAGTCGAA GCAACTCTAT CAGCAAAGGA ATAA
|
|---|
| Protein sequence | MKLNARGLTL DLSCPQVMGI LNVTPDSFSD GGKHNTLNAA LIHAEQMISA GATFIDVGGE
STRPGADEVS IEEELDRVVP VVEALAQRFE VWISVDTSKP EVITASAQAG AHLINDIRAL
REPGALEAAA ATGLPVCLMH MQGLPKTMQQ TPHYDDVVGE VMAFFEHHIA RCVAAGIPRE
QLLLDPGFGF GKNLQHNYRL LGHLETLHRC GLPLLVGMSR KTMLGQLLGV PPLERVYGSV
ACAVIAAMKG AHIIRVHDVK ATVDAIRVVE ATLSAKE
|
|---|
| |