| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3463 |
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| Symbol | |
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| ID | 8117929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 3934913 |
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| End bp | 3935869 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644853837 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_003005754 |
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| Protein GI | 251791033 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCGTC CTCGCCGTCG TGGTCGGGAT ATCCACGGCG TTCTGCTGTT GGATAAACCA
CAAGGTGCAT CTTCTAACGA TGTACTGCAG AAGGTAAAGC GCCTCTTTAA TGCCAATAAA
GCCGGGCACA CCGGTGCGCT GGACCCACTG GCAACCGGTA TGCTGCCGGT ATGTTTGGGT
GAAGCGACCA AGTTTTCCCA ATACCTGCTG GATGCGGATA AACGTTACCG GGTGATAGCC
CGTCTGGGGC AACGAACCGA TACGTCAGAT GCAGACGGTA ATGTGATTCA GGAACGTCCT
GTTGCTTTTA CCCATGATCT GCTGATGCAG GCGCTGGATA GTTTCCGCGG CGATACCCAG
CAGGTGCCGT CAATGTATTC CGCTCTGAAA TACCAGGGGC GCCCATTGTA CGAATATGCC
CGTCAGGGGC AGGTCGTGCC GCGGGAAGCG CGTAATATCA CCGTTTATGA ACTGCAGTTT
ATCCGCTGGG AAGCCGATGA GCTGGAACTG GAAATCCACT GCTCCAAGGG AACGTACATC
CGTACCATCA TTGATGATTT GGGTGAGAAG CTGGGGTGCG GCGCCCATGT GGTCTACCTG
CGCCGGTTGC AGGTAGCGAC GTATCCGCTT GAGCGGATGG TGACCCTGGA ACAGTTGCAG
GCGTTGCGTG AGCAGGCGGA AACTCAGGAA CAACCAATCG GTGAATTGCT GGATGTATTA
TTGTTGCCGA TGGATACCGC CGTGCAGGCA TTTCCTGAAG TCAACCTATC GCCGGTAGTG
GCGGGTTACC TCAAGCTGGG TCAGGCTGTG CGTGCTGCCG CAGCACCAGT TGATGGCATG
GTACGCATCA CCGAGGGCGA TGAACACCGC TTTATCGGCA TGGGTGAAAT CGATGACGAA
GGACGGGTGG CGCCGCGTCG TCTGGTCGTG GAAAACCCTG TGCCGACGAA TGCCTGA
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| Protein sequence | MSRPRRRGRD IHGVLLLDKP QGASSNDVLQ KVKRLFNANK AGHTGALDPL ATGMLPVCLG
EATKFSQYLL DADKRYRVIA RLGQRTDTSD ADGNVIQERP VAFTHDLLMQ ALDSFRGDTQ
QVPSMYSALK YQGRPLYEYA RQGQVVPREA RNITVYELQF IRWEADELEL EIHCSKGTYI
RTIIDDLGEK LGCGAHVVYL RRLQVATYPL ERMVTLEQLQ ALREQAETQE QPIGELLDVL
LLPMDTAVQA FPEVNLSPVV AGYLKLGQAV RAAAAPVDGM VRITEGDEHR FIGMGEIDDE
GRVAPRRLVV ENPVPTNA
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