| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3459 |
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| Symbol | |
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| ID | 8117925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 3929089 |
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| End bp | 3930963 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644853833 |
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| Product | ATP-dependent RNA helicase DeaD |
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| Protein accession | YP_003005750 |
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| Protein GI | 251791029 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.319039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAGT TTGAAACCTC TTTTGCTAGC TTGGGGCTGT CTGCTCCTAT TCTGAATGCA
CTGTCTGAGA TGGGGTATGA AAAACCGTCC CCGATTCAGG CGGAATGTAT TCCTCATCTG
CTCAACGGGC GCGACGTACT GGGTATGGCG CAGACCGGGA GCGGCAAGAC CGCGGCGTTT
TCCCTGCCGC TGCTGAACAA TATCAAGGCT GACCTGAAAG CACCGCAGTT GCTGGTGCTG
GCACCGACCC GTGAGCTGGC GGTGCAGGTT GCAGAAGCCT GTAACGAATT TTCCAAACAC
ATGCAGGGCG TCAATGTGGT CGCACTGTAT GGCGGCCAGC GTTATGACGT GCAGTTGCGC
GCGCTGCGCC AGGGACCGCA GGTTGTCGTC GGTACGCCGG GACGTTTGCT GGATCACCTG
AAACGCGGTA CGCTGGACCT GTCTAACCTG AGTGGTCTGG TGCTGGACGA AGCCGACGAA
ATGCTGCGTA TGGGCTTCAT CGAAGATGTA GAAAACATCA TGGCGCAGAT CCCGGCTGAG
CATCAGACGG CGCTGTTCTC CGCTACCATG CCGGAGGCGA TCCGTCGCAT TACCCGTCGT
TTCATGAACG ATCCGCAGGA AGTGCGTATT CAATCCAGCG TGACGACCCG CCCGGATATC
AGCCAGAGCT ACTGGACGGT ATACGGTATG CGTAAAAACG AAGCGCTGAT CCGTTTCCTG
GAAGCGGAAG ATTTTGATGC TGCGATCATC TTCGTGCGTA CCAAAAACGC TACGCTGGAA
GTGGCCGAAG CGCTGGAGCG CAGCGGTTAT AACAGTGCCG CGCTGAACGG CGACATGAAC
CAGGCGCTGC GTGAGCAAAC GCTGGAACGT CTGAAAGACG GTCGTCTGGA TATTCTTATC
GCGACCGACG TGGCCGCACG TGGTCTGGAT GTTGATCGTA TCAGCCTGGT GGTGAACTAC
GATATCCCGA TGGATTCCGA ATCCTACGTA CACCGTATCG GCCGTACCGG TCGTGCCGGT
CGTGCCGGTC GTGCGCTGTT GTTCGTAGAA AACCGCGAGC GTCGCCTGCT GCGTAATATC
GAACGCACCA TGAAGCTGAC GATCCCGGAA GTCGATTTGC CGAACGCCGA ACTGCTGGGC
CAGCGTCGTC TGGCGAAGTT TGCCGCTAAA GTACAGCAAC AGCTGGAAAG CAGTGATCTG
GATATGTACC GTGCGCTGCT CGGCAAATTG CAGCCGCAGG AAGAGCTGGA TATCGAAACG
CTGGCTGCCG CACTGCTGAA AATGGCACAG GGTGAACGTC CGCTGATTCT GCCGCCGGAT
CCGGTGGTTG AGCGCCGTCC GCGTCGTGAG TTCCGCGAAC GTGATGATCG TTTCGAACGC
CGTGGCGAGC GCAACGAGCG TGGCCCGCGT GGTGGTGATG AGCGTCCGGC TCGTCGTGAG
CGCCGTGACG TGGGTGAAAT GGATCTGTAT CGGATCGAAG TGGGTCGTGA CGATGGCGTA
GAAGTGCGTC ATATCGTGGG CGCGATTGCT AACGAAGGCG ATATCAGCAG CCGTTACATT
GGTAACATCA AACTGTTTGC TTCGCACTCC ACTATCGAAC TGCCGAAAGG GATGCCGGGA
GACTTGCTGT CGCACTTTAC TCGCACGCGT ATTCTGAACA AGCCGATGAA CATGCAACTG
ATGGGTGAGG CCCAGCCGCA TGAACGTCGC GAGCGTCGTG AAGGCGGTGA GCGCGGCGAA
CGTGGCGCCC GTGGATTCGG TGATCGCGCC GGCAGCGGCC GTGGTCGTCC GTTCAGCGGT
GAGCGCCGCG AAGGTGGCGA GCGTCGCGGT AACCGCGACG GCCAGCGTGC TCCACGTCGT
TTCAACGATG CCTGA
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| Protein sequence | MAEFETSFAS LGLSAPILNA LSEMGYEKPS PIQAECIPHL LNGRDVLGMA QTGSGKTAAF
SLPLLNNIKA DLKAPQLLVL APTRELAVQV AEACNEFSKH MQGVNVVALY GGQRYDVQLR
ALRQGPQVVV GTPGRLLDHL KRGTLDLSNL SGLVLDEADE MLRMGFIEDV ENIMAQIPAE
HQTALFSATM PEAIRRITRR FMNDPQEVRI QSSVTTRPDI SQSYWTVYGM RKNEALIRFL
EAEDFDAAII FVRTKNATLE VAEALERSGY NSAALNGDMN QALREQTLER LKDGRLDILI
ATDVAARGLD VDRISLVVNY DIPMDSESYV HRIGRTGRAG RAGRALLFVE NRERRLLRNI
ERTMKLTIPE VDLPNAELLG QRRLAKFAAK VQQQLESSDL DMYRALLGKL QPQEELDIET
LAAALLKMAQ GERPLILPPD PVVERRPRRE FRERDDRFER RGERNERGPR GGDERPARRE
RRDVGEMDLY RIEVGRDDGV EVRHIVGAIA NEGDISSRYI GNIKLFASHS TIELPKGMPG
DLLSHFTRTR ILNKPMNMQL MGEAQPHERR ERREGGERGE RGARGFGDRA GSGRGRPFSG
ERREGGERRG NRDGQRAPRR FNDA
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