Gene Dd1591_3330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3330 
Symbol 
ID8119066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp3787560 
End bp3788705 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content60% 
IMG OID644853706 
Productmurein hydrolase B 
Protein accessionYP_003005627 
Protein GI251790906 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02282] lytic murein transglycosylase B 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCCA CGTTGTTTTT GACTGAATTA TATGGATATC TGATGCGTCG CCTGGTTGCT 
GTTTTCCCGT TGTTGCTGGC GCTGTCCGCC TGCAGCAATA AATCCACTGA GCCCGCTGGG
GCTGAAATTA TCGGTACACC TGCCGCCAAC GCCCCATCCG GCGGCTTTTT GTTGTCTCCC
GCCCATGCCG GCGCCATGCT GACCAACGGC GATTTCGCCA ACAGCCCGGA AGTTAACCGC
TTCGTGGATA AGATGGTGCA GCAGCATGGT TTCGAACGCC AACAACTGCA CGACGTGCTG
GCGCAGGCGC AGCGGCTGGA CTGGGTCATC AGGCTGATGG ATAAACAAGC CCCCGCGCCG
TCAACCGCTA CGCCTTCCAA TATTCCCAAC GGTGCCTGGC TACGTTACCG CAAGCAATTC
ATCACCCCGG ATAACCTGCA AAACGGCGTT GCGTTCTGGA ACCAGTATCA GGATGCGCTG
GCGCGCGCGC AGCAGGTTTA CGGCGTCCCG CCGGAGATCA TCGTCGGTAT TATCGGGGTG
GAAACCCGCT GGGGCCGGGT GATGGGCAAA ACCCGCATAC TGGATGCGCT GGCGACATTG
GCCTTCGCCT ACCCGCGCCG CGCCGCGTAC TTCCAAAGCG AGCTGGAGTA TTTTCTGCTG
ATGGCGCGGG AAGACGGCTT TGACCCGCTG TCGCTGCGTG GTTCGTTTGC CGGTGCGATG
GGTTACGGCC AGTTTATGCC ATCGGCGTTC AAGAAATACG CGGTGGATTT CAACGGCGAC
GGCATTGCCA ACCTGTGGGA CCCGGTAGAC GCCATCGGCA GTGTCGCCAA CTACTTCAAA
TCAAACGGCT GGCAGCCAGA CGGGCAGGTC GCGGTGACCG CCAGCGGCCA GACTTTCGCA
CTGGAAACCG GCTTCAAAAC CCGCTATTCC GTGTCGACGC TGGCGGCGGC CGGGCTGCGC
CCAACCGCTT CATTAGGCGG CGCGCAGGAA GCCAGCTTAC TGCGTCTCGA CATGGGCAGT
TACTACCAGT TCTGGTATGG CCTGCCGAAC TTCTACGCCA TCACCCGTTA CAACAACAGC
GTGCACTACG CCATGGCGGT ATGGCAGTTA GGGGATGAAG TCAGAAAAGC ACGGCAGGGG
TATTAA
 
Protein sequence
MAATLFLTEL YGYLMRRLVA VFPLLLALSA CSNKSTEPAG AEIIGTPAAN APSGGFLLSP 
AHAGAMLTNG DFANSPEVNR FVDKMVQQHG FERQQLHDVL AQAQRLDWVI RLMDKQAPAP
STATPSNIPN GAWLRYRKQF ITPDNLQNGV AFWNQYQDAL ARAQQVYGVP PEIIVGIIGV
ETRWGRVMGK TRILDALATL AFAYPRRAAY FQSELEYFLL MAREDGFDPL SLRGSFAGAM
GYGQFMPSAF KKYAVDFNGD GIANLWDPVD AIGSVANYFK SNGWQPDGQV AVTASGQTFA
LETGFKTRYS VSTLAAAGLR PTASLGGAQE ASLLRLDMGS YYQFWYGLPN FYAITRYNNS
VHYAMAVWQL GDEVRKARQG Y