| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3314 |
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| Symbol | |
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| ID | 8119050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 3766705 |
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| End bp | 3768180 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644853690 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003005611 |
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| Protein GI | 251790890 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCCAA AGGTCTCTAG CCTGGCGTGG GCGAAAAGCC AGGGCATTTT AATTGAGAGG
CAAGATGACG CCTGGCGGAT TTATTACCGT AGCGATGCCC ACCCGCAGGC GATTATGAGT
GCGTTGCGCT ATTGCCCGCC GGGCGCGTTA CTCAGCGCCA TAGACGATGA CGCCTTCGCG
GAGCGCATCG CCAGCACGTT TCAGAATAGC GATCAGCGGG CGAGTGAGGT TATGGCCGGG
CTGAGCGAAG ATCTGGATAT GTACCAGTTA GCCGAGGCGC TGCCGGTGTA CGAAGAGATT
CTTAATAACG AAGATAATCC GCCTATCGTT AAGCTGATTA ACGCGATTCT TGCGCAGGCG
CTGAAGGAGC ACGCCTCCGA TGTCCATATT GAAACGTTTG AGCAGCGGGT CGCCATCCGT
TTTCGCCTTG ATGGCGTACT GCACAAAAAG CTTGAGCCGG AACGGCGCCT CTCTTCGTTG
CTGGTTTCGC GGCTAAAGAT TATGTCCCGC CTGGATATTG CAGAAAAACG CAAACCGCAG
GATGGGCGCA TGAGTTTACG CATATTGGGC CGGGCCGTAG ATGTCAGGGT GTCGGTATTA
CCCTCCAGTT ATGGCGAAAG GATTGTGCTG CGCTTGCTGG ATAAAAACGC CGTTAAACTG
GATTTACGTC AGCTCGGCAT ACCTGATGCG GTGAGAAAAA AGGTGGTGTC GTTAGTGAGC
CGGCCGAATG GCATTATTCT GGTCACGGGG CCGACCGGGT CGGGTAAAAG CTCAACGCTG
TATGCGATGA TCAACGAACT GGATCAAGAA AAGCTGAACA TCATGACCAT CGAAGATCCG
GTCGAATATG ACATCGCCAA TATCTCGCAG ACTCAGGTTA ACGGCAAAAT TGGTATGACG
TTCGCGAAAG GGTTGCGGGC TATTTTGCGT CAAGACCCTG ACGTGATTTT AATCGGCGAA
ATTCGCGATC AGGAAACGGC GCAGATAGCG GTACAGGCAT CGATGACCGG CCATCTGGTG
TTGTCTACGC TACATACCAA CACCGCCATC AGCGCACTTA CCCGCTTGCA GGATATGGGC
GTAGAGCCTT TTATGCTGGC CAGTGCGCTG AATGCCGTCA TGGCGCAACG ACTGGTGAGG
TGCTTGTGCG TTCACTGCCG TCAGCCCGTA GCCATCACGG AGGCGGAATG CCAGATGCTC
AGCGTGCCCT GGCGGGAGGG CATGACGGGA TATCGGGCAC AGGGCTGCCC GGCCTGTTTT
AATACCGGCT ATCTCGGGCG TACGCTGATT CAGACGCTGG TGGTCATTAA TGAACCGATG
CGTGTCGGGA TCTATCAGCA AAAAAATGAG AGTGAGTTGG CGGCGCTGGC TGGAAATGCG
GCTTCACTCA GCCTGGATGG GGTCAATAAA GTCCTGGCTG GTTTAACCTC GCTTGATGAG
GTCATCCGGG TTACAGGTGA GCTTGATGAT GCGTAA
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| Protein sequence | MHPKVSSLAW AKSQGILIER QDDAWRIYYR SDAHPQAIMS ALRYCPPGAL LSAIDDDAFA
ERIASTFQNS DQRASEVMAG LSEDLDMYQL AEALPVYEEI LNNEDNPPIV KLINAILAQA
LKEHASDVHI ETFEQRVAIR FRLDGVLHKK LEPERRLSSL LVSRLKIMSR LDIAEKRKPQ
DGRMSLRILG RAVDVRVSVL PSSYGERIVL RLLDKNAVKL DLRQLGIPDA VRKKVVSLVS
RPNGIILVTG PTGSGKSSTL YAMINELDQE KLNIMTIEDP VEYDIANISQ TQVNGKIGMT
FAKGLRAILR QDPDVILIGE IRDQETAQIA VQASMTGHLV LSTLHTNTAI SALTRLQDMG
VEPFMLASAL NAVMAQRLVR CLCVHCRQPV AITEAECQML SVPWREGMTG YRAQGCPACF
NTGYLGRTLI QTLVVINEPM RVGIYQQKNE SELAALAGNA ASLSLDGVNK VLAGLTSLDE
VIRVTGELDD A
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